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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:LOX2  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT3G45140LOX2GSP:8 PPI:8LOX2 (LIPOXYGENASE 2); lipoxygenase.
Subcellar localization
plastid: Pubmed16381842;
Related organ
carpel      detergent fraction,1-DE      Related article
carpel      urea fraction,1-DE      Related article
carpel      soluble fraction,1-DE      Related article
cell suspension culture      full cell extract,1-DE      Related article
cell suspension culture      soluble fraction,1-DE      Related article
cotyledon      SDS fraction,1-DE      Related article
cotyledon      soluble fraction,1-DE      Related article
flower      SDS fraction,1-DE      Related article
flower      soluble fraction,1-DE      Related article
flower bud      SDS fraction,1-DE      Related article
flower bud      soluble fraction,1-DE      Related article
juvenile leaf      SDS fraction,1-DE      Related article
juvenile leaf      soluble fraction,1-DE      Related article
silique      urea fraction,1-DE      Related article
silique      soluble fraction,1-DE      Related article
silique      detergent fraction,1-DE      Related article
shoot      Phosphopeptide enriched fraction: SDS fraction of A. thaliana shoots; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
shoot      Flow through fraction: SDS fraction of A. thaliana shoots; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
shoot      Flow through fraction: soluble fraction of A. thaliana shoots; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: SDS fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: SDS fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Flow through fraction: SDS fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchae; IMAC affinity chromatography ng      Related article
rosette      Flow through fraction: SDS fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: Soluble fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: Soluble fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Flow through fraction: Soluble fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
rosette      Flow through fraction: Soluble fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
Representative Gene Model Description
AT3G45140.1:LIPOXYGENASE 2 (LOX2); FUNCTIONS IN: lipoxygenase activity; INVOLVED IN: in 7 processes; LOCATED IN: chloroplast thylakoid membrane, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipoxygenase, LH2 (InterPro:IPR001024), Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976), Lipoxygenase, C-terminal (InterPro:IPR013819), Lipoxygenase (InterPro:IPR000907), Lipoxygenase, plant (InterPro:IPR001246); BEST Arabidopsis thaliana protein match is: lipoxygenase family protein (TAIR:AT1G67560.1); Has 1102 Blast hits to 1092 proteins in 146 species: Archae - 0; Bacteria - 64; Metazoa - 477; Fungi - 37; Plants - 508; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink).

Related KEGG pathway    
Metabolic Pathways
   |----------Lipid Metabolism
   |--------------------alpha-Linolenic acid metabolismLink to keggView overall Pathway
Predicted Mutant Phenotypes
seed    PO:0009010;    lateral root  PO:0020121;    vascular leaf    PO:0009025;    seedling development stage  PO:0007131;    whole plant    PO:0000003;    axillary shoot system  PO:0006343;    stem    PO:0009047;    stem internode  PO:0020142;    rosette leaf    PO:0000014;    
Database cross-references
TAIR Gene: AT3G45140;
IPI: IPI00548522;
UniParc: UPI000012E819;
REFSEQ_PROVISIONAL: NP_566875.1;
KEGG: AT3G45140;

GSPannotationmethodsrelated
AT4G18040(EIF4E)EIF4E (EUKARYOTIC TRANSLATION INITATION FACTOR 4E); RNA binding / RNA cap binding / protein binding / translation initiation factortext mining 11117257(yeast-2-hybrid assay)
AT5G56750Ndr family proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT4G18040(EIF4E)EIF4E (EUKARYOTIC TRANSLATION INITATION FACTOR 4E); RNA binding / RNA cap binding / protein binding / translation initiation factortext mining 11117257(Reconstituted Complex)
AT4G18040(EIF4E)EIF4E (EUKARYOTIC TRANSLATION INITATION FACTOR 4E); RNA binding / RNA cap binding / protein binding / translation initiation factortext mining 11117257(yeast-2-hybrid)
AT5G56750(NDL1)No related data.text mining 21952135(yeast-2-hybrid)
AT3G22400No related data.EC
AT1G67560lipoxygenase family proteinEC
AT1G55020(LOX1)LOX1; lipoxygenaseEC

 


Transcriptional Regulation

Transcription factorTarget geneDetail infoRelated Artical
SEPALLATA3[AT1G24260]AT3G45140No detail info. 19385720

 

TFFamilyConfidenceDetails
AGMADSLAT4G18960
AGL1MADSLAT3G58780
AGL15MADSLAT5G13790
AGL2MADSLAT5G15800
AGL3MADSHAT2G03710
AREB2bZIPLAT3G19290
ARR10GARPLAT4G31920
ATHB1HD-ZIPLAT3G01470
RAV1(2)AP2/EREBPHAT1G13260
WRKY18WRKY(Zn)HAT4G31800

Related PPIs for TFs
TF1TF2PPI
AT4G18960AT3G58780GO
AT4G18960AT5G13790GO
AT4G18960AT5G15800GO
AT3G58780AT5G13790GO
AT3G58780AT5G15800GO