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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:SUS4  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT3G43190SUS4GSP:6 PPI:13SUS4; UDP-glycosyltransferase/ sucrose synthase/ transferase, transferring glycosyl groups.
Subcellar localization
vacuole: Pubmed14760709; plasma membrane: Pubmed15574830;
Related organ
cell suspension culture      full cell extract,1-DE      Related article
cell suspension culture      SDS fraction,1-DE      Related article
cell suspension culture      detergent fraction,1-DE      Related article
cell suspension culture      soluble fraction,1-DE      Related article
cell suspension culture      urea fraction,1-DE      Related article
cell suspension culture      soluble fraction,Schagger 1-DE      Related article
flower      SDS fraction,1-DE      Related article
root      soluble fraction,1-DE      Related article
root      SDS fraction,1-DE      Related article
silique      urea fraction,1-DE      Related article
silique      soluble fraction,1-DE      Related article
silique      detergent fraction,1-DE      Related article
Representative Gene Model Description
AT3G43190.1:SUS4; FUNCTIONS IN: UDP-glycosyltransferase activity, sucrose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: sucrose biosynthetic process, response to hypoxia; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Sucrose synthase, plants and cyanobacteria (InterPro:IPR012820), Sucrose synthase (InterPro:IPR000368), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: SUS1 (SUCROSE SYNTHASE 1); UDP-glycosyltransferase/ sucrose synthase (TAIR:AT5G20830.2); Has 5004 Blast hits to 4999 proteins in 882 species: Archae - 180; Bacteria - 2552; Metazoa - 92; Fungi - 52; Plants - 473; Viruses - 0; Other Eukaryotes - 1655 (source: NCBI BLink).

Related KEGG pathway    
Metabolic Pathways
   |----------Carbohydrate Metabolism
   |--------------------Starch and sucrose metabolismLink to keggView overall Pathway
Database cross-references
TAIR Gene: AT3G43190;
IPI: IPI00540190;
UniParc: UPI00000487BD;
REFSEQ_PROVISIONAL: NP_566865.2;
KEGG: AT3G43190;

GSPannotationmethodsrelated
AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT5G03240(UBQ3)UBQ3 (POLYUBIQUITIN 3); protein bindingtext mining 23667124(Affinity Capture-MS)
AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21952135(yeast-2-hybrid)
AT5G49190(SUS2)SUS2 (SUCROSE SYNTHASE 2); UDP-glycosyltransferase/ sucrose synthase/ transferase, transferring glycosyl groupsEC
AT4G02280No related data.EC
AT5G20830(SUS1)SUS1 (SUCROSE SYNTHASE 1); UDP-glycosyltransferase/ sucrose synthaseEC

 

Predicted
Functional Partners
annotationTotal
AT5G37180No related data.
AT1G73370No related data.
AT2G39770No related data.
AT5G48300No related data.
AT5G49190No related data.
AT4G02280No related data.
AT5G20830No related data.

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
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Transcriptional Regulation

Transcription factorTarget geneDetail infoRelated Artical
LFY[AT5G61850]AT3G43190 Relationship:Activation 14736918

 

TFFamilyConfidenceDetails
AGL3MADSLAT2G03710
ARR10GARPLAT4G31920
ATHB1HD-ZIPLAT3G01470
ATHB5HD-ZIPLAT5G65310
GATA-2C2C2(Zn) GATAHAT2G45050
GATA-3C2C2(Zn) GATALAT4G34680
GATA-4C2C2(Zn) GATALAT3G60530
ID1C2H2(Zn)LAT1G25250
MYB2MYBLAT2G47190
RAP2.2AP2/EREBPLAT3G14230
RAV1(2)AP2/EREBPHAT1G13260
TGA1bZIPHAT5G65210