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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:ABI3  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT3G24650ABI3GSP:34 PPI:34ABI3 (ABA INSENSITIVE 3); DNA binding / basal transcription repressor/ transcription activator/ transcription factor.
Subcellar localization
nucleus: Pubmed16381842;
Representative Gene Model Description
AT3G24650.1:ABA INSENSITIVE 3 (ABI3); FUNCTIONS IN: basal transcription repressor activity, transcription factor activity, transcription activator activity, DNA binding; INVOLVED IN: in 6 processes; EXPRESSED IN: lateral root, embryo, seed coat; EXPRESSED DURING: dry seed stage, seed maturation stage; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: FUS3 (FUSCA 3); DNA binding / transcription activator/ transcription factor (TAIR:AT3G26790.1); Has 4627 Blast hits to 2362 proteins in 250 species: Archae - 0; Bacteria - 117; Metazoa - 1432; Fungi - 353; Plants - 843; Viruses - 101; Other Eukaryotes - 1781 (source: NCBI BLink).

Related Mutant  
M1759 Related gene:AT1G15100; AT3G24650;
Method:NULL
Phenotype:Indeed, our ABA response assays indicated that the rha2a abi3-8 double mutant is also significantly more insensitive to ABA than the single mutants (Fig. 5).(PMID: 19286935)A, Quantification of cotyledon greening. Cotyledon-greening percentage of the indicated genotypes grown on medium containing different concentrations of ABA was recorded at 5 d after the end of stratification.C, Root growth measurements. Seedling root length of the indicated genotypes grown on different concentrations of ABA was measured at 5 d after the end of stratification(PMID: 19286935)
Related PO:root  PO:0009005    cotyledon  PO:0020030          
Related Datasource Link:

M5405 Related gene:AT2G42620; AT3G24650;
Method:NULL
Phenotype:max2 is epistatic to abi3 and abi5 for the hypocotyl elongation phenotype under white light
Related PO:hypocotyl  PO:0020100    
Related Datasource Link:
*

Predicted Mutant Phenotypes
seed    PO:0009010;    chlorenchyma  PO:0005426;    vascular leaf    PO:0009025;    whole plant  PO:0000003;    seedling development stage    PO:0007131;    0 seed germination stage  PO:0007057;    
Database cross-references
Entrez Gene: h;
TAIR Gene: AT3G24650;
IPI: h;
UniProtKB/TrEMBL: h;
UniParc: h;
REFSEQ_PROVISIONAL: h;
KEGG: AT3G24650;

GSPannotationmethodsrelated
AT5G11260(HY5)HY5 (ELONGATED HYPOCOTYL 5); DNA binding / double-stranded DNA binding / transcription factortext mining 12657652 12023303(yeast-2-hybrid assay)
AT4G26080(ABI1)ABI1 (ABA INSENSITIVE 1); calcium ion binding / protein serine/threonine phosphatasetext mining 11489176(yeast-2-hybrid assay)
AT4G01120(GBF2)GBF2 (G-BOX BINDING FACTOR 2); DNA binding / sequence-specific DNA binding / transcription factortext mining 12657652(NULL)
AT3G44460(DPBF2)DPBF2; DNA binding / transcription activator/ transcription activator binding / transcription factortext mining 12657652(NULL)
AT2G36270(ABI5)ABI5 (ABA INSENSITIVE 5); DNA binding / transcription activator/ transcription factortext mining 11489176()
AT3G26790(FUS3)FUS3 (FUSCA 3); DNA binding / transcription activator/ transcription factortext mining 16731585(NULL)
AT1G28300(LEC2)LEC2 (LEAFY COTYLEDON 2); DNA binding / transcription factortext mining 16731585(NULL)
AT3G12250(TGA6)TGA6 (TGACG MOTIF-BINDING FACTOR 6); DNA binding / transcription factortext mining 12657652(NULL)
AT2G40220(ABI4)ABI4 (ABA INSENSITIVE 4); DNA binding / transcription factortext mining 11489176(yeast-2-hybrid assay)
AT5G24800(BZIP9)BZIP9 (BASIC LEUCINE ZIPPER 9); DNA binding / protein heterodimerization/ transcription factortext mining 12657652(NULL)
AT2G04880(ZAP1)ZAP1 (ZINC-DEPENDENT ACTIVATOR PROTEIN-1); transcription activator/ transcription factor/ zinc ion bindingtext mining 16113229(NULL)
AT2G41070(EEL)EEL (ENHANCED EM LEVEL); DNA binding / transcription factortext mining 12657652(NULL)
AT1G20330(SMT2)SMT2 (STEROL METHYLTRANSFERASE 2); S-adenosylmethionine-dependent methyltransferasetext mining 15548737(NULL)
AT2G46270(GBF3)GBF3 (G-BOX BINDING FACTOR 3); sequence-specific DNA binding / transcription factortext mining 12657652(NULL)
AT4G17730(SYP23)SYP23 (SYNTAXIN OF PLANTS 23); SNAP receptortext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT4G11070(WRKY41)WRKY41; transcription factortext mining 24946881(GSPDM)
AT1G62830(LDL1)LDL1 (LSD1-LIKE1); amine oxidase/ electron carrier/ oxidoreductasetext mining 25852712(GSPDM)
AT3G13682(LDL2)LDL2 (LSD1-LIKE2); amine oxidase/ electron carrier/ oxidoreductasetext mining 25852712(GSPDM)
AT2G01570(RGA1)RGA1 (REPRESSOR OF GA1-3 1); protein binding / transcription factortext mining 24326588(Affinity Capture-Western)
AT5G20910zinc finger (C3HC4-type RING finger) family proteintext mining 10743655(Reconstituted Complex)
AT5G61380(TOC1)TOC1 (TIMING OF CAB EXPRESSION 1); transcription regulator/ two-component response regulatortext mining 10743655(yeast-2-hybrid)
AT1G21700(SWI3C)No related data.text mining 23449474(yeast-2-hybrid)
AT3G22320(NRPB5)NRPB5; DNA binding / DNA-directed RNA polymerasetext mining 10743655(yeast-2-hybrid)
AT5G20910zinc finger (C3HC4-type RING finger) family proteintext mining 15998807(Reconstituted Complex)
AT2G36270(ABI5)ABI5 (ABA INSENSITIVE 5); DNA binding / transcription activator/ transcription factortext mining 11489176(yeast-2-hybrid)
AT1G08780(AIP3)AIP3 (ABI3-INTERACTING PROTEIN 3); unfolded protein bindingtext mining 10743655(Reconstituted Complex)
AT3G54620(BZIP25)BZIP25 (BASIC LEUCINE ZIPPER 25); protein heterodimerization/ transcription factortext mining 12657652(yeast-2-hybrid)
AT1G14920(GAI)GAI (GIBBERELLIC ACID INSENSITIVE); transcription factortext mining 24326588(Affinity Capture-Western)
AT5G15840(CO)CO (CONSTANS); transcription factor/ transcription regulator/ zinc ion bindingtext mining 10743655(yeast-2-hybrid)
AT2G46020(BRM)transcription regulatory protein SNF2, putativetext mining 23449474(yeast-2-hybrid)
AT4G17730(SYP23)SYP23 (SYNTAXIN OF PLANTS 23); SNAP receptortext mining 21952135(yeast-2-hybrid)
AT2G20180(PIL5)PIL5 (PHYTOCHROME INTERACTING FACTOR 3-LIKE 5); DNA binding / phytochrome binding / transcription factortext mining 21467583(Reconstituted Complex)
AT2G40220(ABI4)ABI4 (ABA INSENSITIVE 4); DNA binding / transcription factortext mining 11489176(yeast-2-hybrid)
AT4G02640(BZO2H1)BZO2H1; DNA binding / protein heterodimerization/ sequence-specific DNA binding / transcription factortext mining 12657652(yeast-2-hybrid)

 


Transcriptional Regulation

Transcription factorTarget geneDetail infoRelated Artical
LEC1[AT1G21970]AT3G24650 Relationship:Activation 15695450
PIL5\PIF1[AT2G20180]AT3G24650No detail info. 19244139

 

TFFamilyConfidenceDetails
ATHB1HD-ZIPLAT3G01470
RAV1(2)AP2/EREBPLAT1G13260