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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:ACT2  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT3G18780ACT2GSP:17 PPI:32ACT2 (ACTIN 2); structural constituent of cytoskeleton.
Subcellar localization
chloroplast    Based on Chloroplast Proteomics data;
Representative Gene Model Description
AT3G18780.1:ACTIN 2 (ACT2); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: in 7 processes; LOCATED IN: nucleus, membrane, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000); BEST Arabidopsis thaliana protein match is: ACT8 (ACTIN 8); copper ion binding / structural constituent of cytoskeleton (TAIR:AT1G49240.1); Has 10901 Blast hits to 10642 proteins in 2290 species: Archae - 6; Bacteria - 3; Metazoa - 4832; Fungi - 2917; Plants - 1090; Viruses - 2; Other Eukaryotes - 2051 (source: NCBI BLink).

AT3G18780.2:ACTIN 2 (ACT2); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: in 7 processes; LOCATED IN: nucleus, membrane, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000); BEST Arabidopsis thaliana protein match is: ACT8 (ACTIN 8); copper ion binding / structural constituent of cytoskeleton (TAIR:AT1G49240.1); Has 11072 Blast hits to 10782 proteins in 2291 species: Archae - 6; Bacteria - 3; Metazoa - 4916; Fungi - 2954; Plants - 1095; Viruses - 2; Other Eukaryotes - 2096 (source: NCBI BLink).

Predicted Mutant Phenotypes
plant embryo    PO:0009009;    root  PO:0009005;    root hair cell    PO:0000256;    seed  PO:0009010;    
Database cross-references
TAIR Gene: AT3G18780;
IPI: IPI00547926; IPI00540686;
UniParc: UPI0000196D35; UPI00001253E6;
REFSEQ_PROVISIONAL: NP_188508.1; NP_850611.1;
KEGG: AT3G18780;

GSPannotationmethodsrelated
AT3G60600(VAP)VAP (VESICLE ASSOCIATED PROTEIN); protein bindingtext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT2G03670(CDC48B)CDC48B; ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide bindingtext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT1G60940(SNRK2.10)SNRK2.10 (SNF1-RELATED PROTEIN KINASE 2.10); kinasetext mining 21798944(yeast-2-hybrid)
AT5G38480(GRF3)GRF3 (GENERAL REGULATORY FACTOR 3); ATP binding / protein binding / protein phosphorylated amino acid bindingtext mining 21094157(Affinity Capture-MS)
AT2G37620(ACT1)ACT1 (ACTIN 1); structural constituent of cytoskeletontext mining 21798944(yeast-2-hybrid)
AT3G60600(VAP)VAP (VESICLE ASSOCIATED PROTEIN); protein bindingtext mining 21952135(yeast-2-hybrid)
AT1G18080(ATARCA)ATARCA; nucleotide bindingtext mining 23435172(PCA)
AT3G24350(SYP32)SYP32 (SYNTAXIN OF PLANTS 32); SNAP receptortext mining 24556609(Affinity Capture-MS)
AT2G03670(CDC48B)CDC48B; ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide bindingtext mining 21952135(yeast-2-hybrid)
AT3G46520(ACT12)ACT12 (ACTIN-12); structural constituent of cytoskeletontext mining 21798944(yeast-2-hybrid)
AT5G03240(UBQ3)UBQ3 (POLYUBIQUITIN 3); protein bindingtext mining 19429840(Affinity Capture-MS)
AT3G12110(ACT11)ACT11 (actin-11); structural constituent of cytoskeletontext mining 21798944(yeast-2-hybrid)
AT5G59880(ADF3)ADF3 (ACTIN DEPOLYMERIZING FACTOR 3); actin bindingtext mining 21798944(yeast-2-hybrid)
AT4G26700(FIM1)No related data.text mining 21481030(PCA)
AT5G65940(CHY1)CHY1 (BETA-HYDROXYISOBUTYRYL-COA HYDROLASE 1); 3-hydroxyisobutyryl-CoA hydrolasetext mining 21798944(yeast-2-hybrid)
AT3G18060transducin family protein / WD-40 repeat family proteintext mining 25428588(yeast-2-hybrid)
AT4G37130hydroxyproline-rich glycoprotein family proteintext mining 23840761(yeast-2-hybrid)

 

Predicted
Functional Partners
annotationTotal
AT5G09810No related data.
AT2G37620No related data.
AT5G12940leucine-rich repeat family protein
AT4G34460No related data.
AT5G59370No related data.
AT3G60830No related data.
AT3G27000No related data.
AT3G46520No related data.
AT3G53750No related data.
AT3G12110No related data.
AT2G42100actin, putative
AT2G42090No related data.
AT1G49240No related data.
AT1G18450No related data.
AT2G42170actin, putative

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
What does the displayed number mean when your mouse moved over a certain icon?(LR)


Transcriptional Regulation

Transcription factorTarget geneDetail infoRelated Artical
GCN5[AT3G54610]AT3G18780No detail info. 18644002
HY5[AT5G11260]AT3G18780No detail info. 18644002
HY5[AT5G11260]AT3G18780 Relationship:Repressed Detected Organs:Cotyledon 17337630
HY5 [AT5G11260]AT3G18780 Relationship:Repressed Detected Organs:Hypocotyl 17337630

 

TFFamilyConfidenceDetails
AGL1MADSLAT3G58780
GATA-1C2C2(Zn) GATALAT3G24050
GATA-2C2C2(Zn) GATALAT2G45050
GATA-3C2C2(Zn) GATALAT4G34680
GATA-4C2C2(Zn) GATALAT3G60530
RAV1(2)AP2/EREBPHAT1G13260
TGA1bZIPLAT5G65210