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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:AT3G16530  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT3G16530AT3G16530GSP:2 PPI:2legume lectin family protein.
Subcellar localization
extracellular: Pubmed15593128; nucleus: Pubmed14617066;
Related organ
cotyledon      SDS fraction,1-DE      Related article
cotyledon      soluble fraction,1-DE      Related article
juvenile leaf      SDS fraction,1-DE      Related article
juvenile leaf      soluble fraction,1-DE      Related article
root      SDS fraction,1-DE      Related article
shoot      Flow through fraction: SDS fraction of A. thaliana shoots; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: SDS fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Flow through fraction: SDS fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchae; IMAC affinity chromatography ng      Related article
rosette      Flow through fraction: SDS fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
rosette      Flow through fraction: Soluble fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
rosette      Flow through fraction: Soluble fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
Representative Gene Model Description
AT3G16530.1:legume lectin family protein; FUNCTIONS IN: carbohydrate binding, sugar binding; INVOLVED IN: response to chitin; LOCATED IN: apoplast, cell wall, nucleus, plant-type cell wall; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Legume lectin, beta domain (InterPro:IPR001220), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), L-type lectin, plant (InterPro:IPR016363); BEST Arabidopsis thaliana protein match is: legume lectin family protein (TAIR:AT3G15356.1); Has 1542 Blast hits to 1529 proteins in 115 species: Archae - 0; Bacteria - 18; Metazoa - 0; Fungi - 0; Plants - 1507; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).

Database cross-references
TAIR Gene: AT3G16530;
IPI: IPI00546204;
UniParc: UPI000009C71D;
REFSEQ_PROVISIONAL: NP_188274.1;
KEGG: AT3G16530;

GSPannotationmethodsrelated
AT5G14240hypothetical proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT5G14240hypothetical proteintext mining 21952135(yeast-2-hybrid)

 


Transcriptional Regulation

TFFamilyConfidenceDetails
AGL15MADSLAT5G13790
AGL3MADSHAT2G03710
ARR10GARPLAT4G31920
ATHB1HD-ZIPHAT3G01470
GT-3bTrihelixLAT5G01380
RAV1(2)AP2/EREBPHAT1G13260