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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:PLDALPHA1  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT3G15730PLDALPHA1GSP:14 PPI:20PLDALPHA1 (PHOSPHOLIPASE D ALPHA 1); phospholipase D.
Subcellar localization
nucleus: Pubmed10198096; plastid: Pubmed15028209; mitochondrion: Pubmed10198096; plasma membrane: Pubmed10198096; cytosol: Pubmed16381842;
Related organ
carpel      detergent fraction,1-DE      Related article
carpel      urea fraction,1-DE      Related article
carpel      soluble fraction,1-DE      Related article
cell suspension culture      full cell extract,1-DE      Related article
cell suspension culture      SDS fraction,1-DE      Related article
cell suspension culture      detergent fraction,1-DE      Related article
cell suspension culture      soluble fraction,1-DE      Related article
cell suspension culture      urea fraction,1-DE      Related article
cotyledon      SDS fraction,1-DE      Related article
cotyledon      soluble fraction,1-DE      Related article
flower      SDS fraction,1-DE      Related article
flower      soluble fraction,1-DE      Related article
flower bud      SDS fraction,1-DE      Related article
flower bud      soluble fraction,1-DE      Related article
juvenile leaf      SDS fraction,1-DE      Related article
juvenile leaf      soluble fraction,1-DE      Related article
pollen      combined fractions, 1-DE      Related article
pollen      soluble fraction, 1-DE      Related article
pollen      urea fraction, 1-DE      Related article
pollen      cyclohexane fraction, 1-DE      Related article
pollen      detergent fraction, 1-DE      Related article
pollen      urea total extract, 1-DE      Related article
pollen      total extract, ICAT labelling, avidin affinity flow through      Related article
root      soluble fraction,1-DE      Related article
root      SDS fraction,1-DE      Related article
seed      detergent fraction,1-DE      Related article
seed      urea fraction,1-DE      Related article
seed      soluble fraction,1-DE      Related article
silique      urea fraction,1-DE      Related article
silique      soluble fraction,1-DE      Related article
silique      detergent fraction,1-DE      Related article
shoot      Phosphopeptide enriched fraction: soluble fraction of A. thaliana shoots; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
shoot      Phosphopeptide enriched fraction: SDS fraction of A. thaliana shoots; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
shoot      Flow through fraction: SDS fraction of A. thaliana shoots; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
shoot      Flow through fraction: soluble fraction of A. thaliana shoots; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: SDS fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: SDS fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Flow through fraction: SDS fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchae; IMAC affinity chromatography ng      Related article
rosette      Flow through fraction: SDS fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: Soluble fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: Soluble fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Flow through fraction: Soluble fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
rosette      Flow through fraction: Soluble fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
Representative Gene Model Description
AT3G15730.1:PHOSPHOLIPASE D ALPHA 1 (PLDALPHA1); FUNCTIONS IN: phospholipase D activity; INVOLVED IN: response to cadmium ion, positive regulation of abscisic acid mediated signaling, fatty acid metabolic process, regulation of stomatal movement, seed germination; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding region, CaLB (InterPro:IPR008973), Phospholipase D (InterPro:IPR015679), Phospholipase D, plant (InterPro:IPR011402), C2 calcium-dependent membrane targeting (InterPro:IPR000008), Phospholipase D/Transphosphatidylase (InterPro:IPR001736); BEST Arabidopsis thaliana protein match is: PLDALPHA2 (phosphlipase d alpha 2); phospholipase D (TAIR:AT1G52570.1); Has 1400 Blast hits to 1052 proteins in 290 species: Archae - 0; Bacteria - 403; Metazoa - 307; Fungi - 281; Plants - 323; Viruses - 0; Other Eukaryotes - 86 (source: NCBI BLink).

Phosphorylation info: Phosphoprotein with evidence,detail info please click the following link
Related KEGG pathway    
Cellular Processes
   |----------Transport and Catabolism
   |--------------------EndocytosisLink to keggView overall Pathway
Metabolic Pathways
   |----------Lipid Metabolism
   |--------------------Glycerophospholipid metabolismLink to keggView overall Pathway
   |--------------------Ether lipid metabolismLink to keggView overall Pathway
Database cross-references
TAIR Gene: AT3G15730;
IPI: IPI00527854;
UniParc: UPI0000131474;
REFSEQ_PROVISIONAL: NP_188194.1;
KEGG: AT3G15730;

GSPannotationmethodsrelated
AT2G26300(GP_ALPHA_1)GP ALPHA 1 (G PROTEIN ALPHA SUBUNIT 1); GTP binding / GTPase/ channel regulator/ signal transducertext mining 16614222(in vitro binding assay)
AT1G31930(XLG3)XLG3 (extra-large GTP-binding protein 3); guanyl nucleotide binding / signal transducertext mining 16614222(yeast-2-hybrid assay)
AT3G53420(PIP2A)PIP2A (PLASMA MEMBRANE INTRINSIC PROTEIN 2A); water channeltext mining 9353280(in vitro binding assay)
AT4G17730(SYP23)SYP23 (SYNTAXIN OF PLANTS 23); SNAP receptortext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT1G05000tyrosine specific protein phosphatase family proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT2G26300(GP ALPHA 1)No related data.text mining 25187041(FRET)
AT1G05000tyrosine specific protein phosphatase family proteintext mining 21952135(yeast-2-hybrid)
AT3G05710(SYP43)SYP43 (SYNTAXIN OF PLANTS 43); SNAP receptortext mining 24556609(Affinity Capture-MS)
AT5G44560(VPS2.2)VPS2.2text mining 22010978(Affinity Capture-MS)
AT4G17730(SYP23)SYP23 (SYNTAXIN OF PLANTS 23); SNAP receptortext mining 21952135(yeast-2-hybrid)
AT5G46630clathrin adaptor complexes medium subunit family proteintext mining 23975897(Affinity Capture-MS)
AT5G53470(ACBP1)ACBP1 (ACYL-COA BINDING PROTEIN 1); acyl-CoA binding / lead ion bindingtext mining 23448237(yeast-2-hybrid)
AT5G15880hypothetical proteintext mining 24833385(PCA)
AT4G34460(AGB1)AGB1 (GTP BINDING PROTEIN BETA 1); GTPase/ nucleotide binding / protein bindingtext mining 25187041(FRET)

 

Predicted
Functional Partners
annotationTotal
AT3G48040No related data.
AT4G28950No related data.
AT4G35020No related data.
AT5G62880No related data.
AT1G55180No related data.
AT5G25370No related data.

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
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Transcriptional Regulation

TFFamilyConfidenceDetails
ATHB1HD-ZIPLAT3G01470
ATHB5HD-ZIPLAT5G65310