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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:RAP2.2  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT3G14230RAP2.2GSP:15 PPI:15RAP2.2; DNA binding / transcription factor.
Representative Gene Model Description
AT3G14230.1:RAP2.2; FUNCTIONS IN: transcription factor activity, DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor and ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: RAP2.12; DNA binding / transcription factor (TAIR:AT1G53910.2); Has 4029 Blast hits to 3775 proteins in 202 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 3993; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink).

AT3G14230.2:RAP2.2; FUNCTIONS IN: transcription factor activity, DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor and ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: RAP2.12; DNA binding / transcription factor (TAIR:AT1G53910.2); Has 4029 Blast hits to 3780 proteins in 203 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 2; Plants - 3991; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink).

AT3G14230.3:RAP2.2; FUNCTIONS IN: transcription factor activity, DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor and ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: RAP2.12; DNA binding / transcription factor (TAIR:AT1G53910.2); Has 4030 Blast hits to 3779 proteins in 202 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 3994; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink).

Related Mutant  
M3740 Related gene:AT3G14230;
Method:insertion site: 4737925,insertion site: 4737958
Phenotype:small plants,small, green seedlings
Related PO:seedling  PO:0008037    whole plant  PO:0000003          
Related Datasource Link:CSHL database
*

Predicted Mutant Phenotypes
flower abscission zone    PO:0006502;    abscission zone  PO:0000146;    
Database cross-references
TAIR Gene: AT3G14230;
KEGG: AT3G14230;

GSPannotationmethodsrelated
AT3G58040(SINAT2)SINAT2 (SEVEN IN ABSENTIA OF ARABIDOPSIS 2); protein binding / ubiquitin-protein ligase/ zinc ion bindingtext mining 17873090(yeast-2-hybrid assay|in vitro reconstitution assay with recombinant protein)
AT1G53170(ERF8)ERF8; DNA binding / transcription factor/ transcription repressortext mining 24823379(yeast-2-hybrid)
AT3G58040(SINAT2)SINAT2 (SEVEN IN ABSENTIA OF ARABIDOPSIS 2); protein binding / ubiquitin-protein ligase/ zinc ion bindingtext mining 17873090(yeast-2-hybrid)
AT1G21700(SWI3C)No related data.text mining 23449474(yeast-2-hybrid)
AT5G14760(AO)AO (L-ASPARTATE OXIDASE); L-aspartate oxidase/ electron carrier/ oxidoreductasetext mining 24823379(yeast-2-hybrid)
AT5G01820(SR1)SR1 (SIGNAL RESPONSIVE 1); calmodulin binding / transcription regulatortext mining 24823379(yeast-2-hybrid)
AT1G25540(PFT1)PFT1 (PHYTOCHROME AND FLOWERING TIME 1); transcription coactivatortext mining 21343311(yeast-2-hybrid)
AT1G10070(BCAT-2)No related data.text mining 24823379(yeast-2-hybrid)
AT5G48240hypothetical proteintext mining 24823379(yeast-2-hybrid)
AT3G48510hypothetical proteintext mining 24823379(yeast-2-hybrid)
AT5G59220(HAI1)No related data.text mining 24823379(yeast-2-hybrid)
AT3G58040(SINAT2)SINAT2 (SEVEN IN ABSENTIA OF ARABIDOPSIS 2); protein binding / ubiquitin-protein ligase/ zinc ion bindingtext mining 17873090(Reconstituted Complex)
AT2G30360(SIP4)SIP4 (SOS3-INTERACTING PROTEIN 4); kinase/ protein kinasetext mining 24823379(yeast-2-hybrid)
AT2G46020(BRM)transcription regulatory protein SNF2, putativetext mining 23449474(yeast-2-hybrid)
AT1G10585transcription factortext mining 24823379(yeast-2-hybrid)

 


Transcriptional Regulation

TFFamilyConfidenceDetails
AGL3MADSLAT2G03710
ATHB1HD-ZIPHAT3G01470
RAV1(2)AP2/EREBPLAT1G13260
WRKY18WRKY(Zn)HAT4G31800