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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:RSH2  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT3G14050RSH2GSP:3 PPI:5RSH2 (RELA-SPOT HOMOLOG 2); GTP diphosphokinase.
Subcellar localization
chloroplast    Based on Chloroplast Proteomics data;
Related organ
cell suspension culture      SDS fraction,1-DE      Related article
Representative Gene Model Description
AT3G14050.1:RELA-SPOT HOMOLOG 2 (RSH2); FUNCTIONS IN: GTP diphosphokinase activity; INVOLVED IN: response to abscisic acid stimulus, response to wounding; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Metal-dependent phosphohydrolase, HD region, subdomain (InterPro:IPR006674), Metal-dependent phosphohydrolase, HD region (InterPro:IPR003607), RelA/SpoT (InterPro:IPR007685); BEST Arabidopsis thaliana protein match is: RSH3 (RELA/SPOT HOMOLOG 3); GTP diphosphokinase (TAIR:AT1G54130.1); Has 8188 Blast hits to 8061 proteins in 1323 species: Archae - 2; Bacteria - 4464; Metazoa - 186; Fungi - 38; Plants - 129; Viruses - 2; Other Eukaryotes - 3367 (source: NCBI BLink).

Database cross-references
TAIR Gene: AT3G14050;
IPI: IPI00520491;
UniParc: UPI0000037268;
REFSEQ_PROVISIONAL: NP_188021.1;
KEGG: AT3G14050;

GSPannotationmethodsrelated
AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT1G20900(ESC)ESC (ESCAROLA); double-stranded DNA bindingtext mining 24218605(yeast-2-hybrid)
AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21952135(yeast-2-hybrid)

 

Predicted
Functional Partners
annotationTotal
AT3G0920060S acidic ribosomal protein P0 (RPP0B)
AT5G18570GTP1/OBG family protein

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
What does the displayed number mean when your mouse moved over a certain icon?(LR)


Transcriptional Regulation

TFFamilyConfidenceDetails
AGMADSLAT4G18960
AGL3MADSHAT2G03710
ATHB1HD-ZIPHAT3G01470
GT-1TrihelixLAT1G13450
GT-2TrihelixHAT1G76890
RAP2.2AP2/EREBPHAT3G14230
RAV1(2)AP2/EREBPHAT1G13260
TGA1bZIPHAT5G65210