Home Contact Sitemap

AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:AT3G13740  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT3G13740AT3G13740GSP:3 PPI:3URF 4-related.
Subcellar localization
chloroplast    Based on Chloroplast Proteomics data;
Representative Gene Model Description
AT3G13740.1:URF 4-related; FUNCTIONS IN: RNA binding, ribonuclease III activity; INVOLVED IN: RNA processing; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease III (InterPro:IPR000999); BEST Arabidopsis thaliana protein match is: RNA binding / ribonuclease III (TAIR:AT1G55140.1); Has 698 Blast hits to 697 proteins in 302 species: Archae - 0; Bacteria - 571; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink).

Database cross-references
TAIR Gene: AT3G13740;
IPI: IPI00537124;
UniParc: UPI00000A2BFD;
REFSEQ_PROVISIONAL: NP_566463.1;
KEGG: AT3G13740;

GSPannotationmethodsrelated
AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21952135(yeast-2-hybrid)
AT2G01570(RGA1)RGA1 (REPRESSOR OF GA1-3 1); protein binding / transcription factortext mining 21798944(yeast-2-hybrid)

 


Transcriptional Regulation

Transcription factorTarget geneDetail infoRelated Artical
SEPALLATA3[AT1G24260]AT3G13740No detail info. 19385720

 

TFFamilyConfidenceDetails
ABF1bZIPLAT1G49720
ATHB1HD-ZIPLAT3G01470
RAV1(2)AP2/EREBPLAT1G13260
TGA1bZIPLAT5G65210