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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:AT3G11850  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT3G11850AT3G11850GSP:3 PPI:4hypothetical protein.
Related organ
cell suspension culture      full cell extract,1-DE      Related article
flower      SDS fraction,1-DE      Related article
Representative Gene Model Description
AT3G11850.1:unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF593 (InterPro:IPR007656); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06560.1); Has 433 Blast hits to 399 proteins in 67 species: Archae - 2; Bacteria - 8; Metazoa - 106; Fungi - 12; Plants - 193; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink).

AT3G11850.2:unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF593 (InterPro:IPR007656); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06560.1); Has 433 Blast hits to 399 proteins in 67 species: Archae - 2; Bacteria - 8; Metazoa - 106; Fungi - 12; Plants - 193; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink).

Database cross-references
TAIR Gene: AT3G11850;
IPI: IPI00532686;
UniParc: UPI000009FE1D;
REFSEQ_PROVISIONAL: NP_187791.1; NP_974289.1;
KEGG: AT3G11850;

GSPannotationmethodsrelated
AT4G34460(AGB1)AGB1 (GTP BINDING PROTEIN BETA 1); GTPase/ nucleotide binding / protein bindingtext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT5G27540(MIRO1)MIRO1 (Miro-related GTP-ase 1); GTP bindingtext mining 21798944(yeast-2-hybrid)
AT4G34460(AGB1)AGB1 (GTP BINDING PROTEIN BETA 1); GTPase/ nucleotide binding / protein bindingtext mining 21952135(yeast-2-hybrid)

 

Predicted
Functional Partners
annotationTotal
AT5G06560hypothetical protein

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
What does the displayed number mean when your mouse moved over a certain icon?(LR)


Transcriptional Regulation

Transcription factorTarget geneDetail infoRelated Artical
SEPALLATA3[AT1G24260]AT3G11850No detail info. 19385720

 

TFFamilyConfidenceDetails
AGL3MADSLAT2G03710