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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:OBE1  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT3G07780OBE1GSP:36 PPI:37OBE1 (OBERON1); protein binding / zinc ion binding.
Related organ
root      soluble fraction,1-DE      Related article
Representative Gene Model Description
AT3G07780.1:OBERON1 (OBE1); FUNCTIONS IN: protein binding, zinc ion binding; INVOLVED IN: embryonic development ending in seed dormancy, root meristem specification, maintenance of root meristem identity, maintenance of shoot apical meristem identity; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1423, plant (InterPro:IPR004082), Zinc finger, PHD-type (InterPro:IPR001965); BEST Arabidopsis thaliana protein match is: OBE2 (OBERON2); protein binding / zinc ion binding (TAIR:AT5G48160.2); Has 8183 Blast hits to 5310 proteins in 542 species: Archae - 76; Bacteria - 767; Metazoa - 3271; Fungi - 576; Plants - 263; Viruses - 84; Other Eukaryotes - 3146 (source: NCBI BLink).

Related Mutant  
M1705 Related gene:AT3G07780; AT5G48160;
Method:NULL
Phenotype:NULL
Related Datasource Link:
*

Predicted Mutant Phenotypes
peduncle    PO:0009053;    outer integument  PO:0020023;    carpel    PO:0009030;    petal  PO:0009032;    inner integument    PO:0020022;    flower abscission zone  PO:0006502;    abscission zone    PO:0000146;    
Database cross-references
TAIR Gene: AT3G07780;
IPI: IPI00522384;
UniParc: UPI000009F5EC;
REFSEQ_PROVISIONAL: NP_566320.1;
KEGG: AT3G07780;

GSPannotationmethodsrelated
AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT2G30960hypothetical proteintext mining 21798944(yeast-2-hybrid)
AT3G17668(ENA)ENA (ENHANCER OF ATNSI ACTIVITY); heat shock protein binding / unfolded protein bindingtext mining 21798944(yeast-2-hybrid)
AT3G07780(OBE1)OBE1 (OBERON1); protein binding / zinc ion bindingtext mining 22378640(Affinity Capture-MS)
AT5G667205-azacytidine resistance protein -relatedtext mining 21798944(yeast-2-hybrid)
AT2G0125060S ribosomal protein L7 (RPL7B)text mining 21798944(yeast-2-hybrid)
AT5G14260SET domain-containing proteintext mining 21798944(yeast-2-hybrid)
AT3G07440hypothetical proteintext mining 21798944(yeast-2-hybrid)
AT5G11450oxygen-evolving complex-relatedtext mining 21798944(yeast-2-hybrid)
AT5G48160(OBE2)OBE2 (OBERON2); protein binding / zinc ion bindingtext mining 22378640(yeast-2-hybrid)
AT1G61590protein kinase, putativetext mining 21798944(yeast-2-hybrid)
AT5G15840(CO)CO (CONSTANS); transcription factor/ transcription regulator/ zinc ion bindingtext mining 21798944(yeast-2-hybrid)
AT5G58950protein kinase family proteintext mining 21798944(yeast-2-hybrid)
AT1G52770phototropic-responsive NPH3 family proteintext mining 21798944(yeast-2-hybrid)
AT3G50330(HEC2)HEC2 (HECATE 2); DNA binding / transcription factortext mining 21798944(yeast-2-hybrid)
AT2G39100zinc finger (C3HC4-type RING finger) family proteintext mining 21798944(yeast-2-hybrid)
AT3G63500hypothetical proteintext mining 22378640(yeast-2-hybrid)
AT3G15160hypothetical proteintext mining 21798944(yeast-2-hybrid)
AT2G26770plectin-relatedtext mining 21798944(yeast-2-hybrid)
AT1G14740hypothetical proteintext mining 22378640(yeast-2-hybrid)
AT3G01300protein kinase, putativetext mining 21798944(yeast-2-hybrid)
AT1G32700zinc-binding family proteintext mining 21798944(yeast-2-hybrid)
AT2G24570(WRKY17)WRKY17; calmodulin binding / transcription factortext mining 21798944(yeast-2-hybrid)
AT5G11090serine-rich protein-relatedtext mining 21798944(yeast-2-hybrid)
AT1G14740hypothetical proteintext mining 22378640(Affinity Capture-MS)
AT1G34320hypothetical proteintext mining 21798944(yeast-2-hybrid)
AT5G37550hypothetical proteintext mining 21798944(yeast-2-hybrid)
AT3G05935hypothetical proteintext mining 21798944(yeast-2-hybrid)
AT4G31550(WRKY11)WRKY11; calmodulin binding / transcription factortext mining 21798944(yeast-2-hybrid)
AT1G18570(MYB51)MYB51 (MYB DOMAIN PROTEIN 51); DNA binding / transcription factortext mining 25049362(yeast-2-hybrid)
AT4G31170protein kinase family proteintext mining 21798944(yeast-2-hybrid)
AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21952135(yeast-2-hybrid)
AT4G17220(MAP70-5)No related data.text mining 21798944(yeast-2-hybrid)
AT3G63500hypothetical proteintext mining 22378640(Affinity Capture-MS)
AT1G6743060S ribosomal protein L17 (RPL17B)text mining 21798944(yeast-2-hybrid)
AT5G48160(OBE2)OBE2 (OBERON2); protein binding / zinc ion bindingtext mining 22378640(Affinity Capture-MS)

 

Predicted
Functional Partners
annotationTotal
AT5G48160No related data.

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
What does the displayed number mean when your mouse moved over a certain icon?(LR)


Transcriptional Regulation

Transcription factorTarget geneDetail infoRelated Artical
SEPALLATA3[AT1G24260]AT3G07780No detail info. 19385720

 

TFFamilyConfidenceDetails
AGL15MADSLAT5G13790
ATHB1HD-ZIPLAT3G01470
CDC5MYBLAT1G09770
RAV1(2)AP2/EREBPLAT1G13260
TGA1bZIPLAT5G65210