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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:AT3G03990  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT3G03990AT3G03990GSP:2 PPI:4esterase/lipase/thioesterase family protein.
Related organ
carpel      soluble fraction,1-DE      Related article
cell suspension culture      full cell extract,1-DE      Related article
cell suspension culture      soluble fraction,1-DE      Related article
cell suspension culture      triton fraction,Schagger 1-DE      Related article
cell suspension culture      soluble fraction,Schagger 1-DE      Related article
flower      SDS fraction,1-DE      Related article
flower      soluble fraction,1-DE      Related article
flower bud      soluble fraction,1-DE      Related article
juvenile leaf      SDS fraction,1-DE      Related article
juvenile leaf      soluble fraction,1-DE      Related article
root      soluble fraction,1-DE      Related article
silique      urea fraction,1-DE      Related article
silique      soluble fraction,1-DE      Related article
rosette      Phosphopeptide enriched fraction: Soluble fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
Representative Gene Model Description
AT3G03990.1:esterase/lipase/thioesterase family protein; FUNCTIONS IN: catalytic activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: hydrolase, alpha/beta fold family protein (TAIR:AT4G37470.1); Has 4484 Blast hits to 4484 proteins in 834 species: Archae - 32; Bacteria - 3257; Metazoa - 82; Fungi - 35; Plants - 141; Viruses - 0; Other Eukaryotes - 937 (source: NCBI BLink).

Database cross-references
TAIR Gene: AT3G03990;
IPI: IPI00546981;
UniParc: UPI00000A9338;
REFSEQ_PROVISIONAL: NP_566220.1;
KEGG: AT3G03990;

GSPannotationmethodsrelated
AT4G13640(UNE16)UNE16 (unfertilized embryo sac 16); transcription factortext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT4G13640(UNE16)UNE16 (unfertilized embryo sac 16); transcription factortext mining 21952135(yeast-2-hybrid)

 

Predicted
Functional Partners
annotationTotal
AT3G24420hydrolase, alpha/beta fold family protein
AT4G37470hydrolase, alpha/beta fold family protein

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
What does the displayed number mean when your mouse moved over a certain icon?(LR)


Transcriptional Regulation

Transcription factorTarget geneDetail infoRelated Artical
SEPALLATA3[AT1G24260]AT3G03990No detail info. 19385720

 

TFFamilyConfidenceDetails
AGMADSLAT4G18960
AGL1MADSLAT3G58780
ARR10GARPLAT4G31920
ATHB1HD-ZIPHAT3G01470
CDC5MYBLAT1G09770
RAV1(2)AP2/EREBPHAT1G13260
TGA1bZIPHAT5G65210
WRKY18WRKY(Zn)HAT4G31800

Related PPIs for TFs
TF1TF2PPI
AT4G18960AT3G58780GO