Home Contact Sitemap

AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:MPPBETA  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT3G02090MPPBETAGSP:7 PPI:108mitochondrial processing peptidase beta subunit, putative.
Subcellar localization
plastid: Pubmed15028209; mitochondrion: Pubmed12444417; vacuole: Pubmed15215502; nucleus: Pubmed15496452;
Related organ
carpel      detergent fraction,1-DE      Related article
carpel      urea fraction,1-DE      Related article
carpel      soluble fraction,1-DE      Related article
cell suspension culture      full cell extract,1-DE      Related article
cell suspension culture      SDS fraction,1-DE      Related article
cell suspension culture      detergent fraction,1-DE      Related article
cell suspension culture      soluble fraction,1-DE      Related article
cell suspension culture      urea fraction,1-DE      Related article
cell suspension culture      triton fraction,Schagger 1-DE      Related article
cell suspension culture      soluble fraction,Schagger 1-DE      Related article
cell suspension culture      SDS fraction,Schagger 1-DE      Related article
cotyledon      SDS fraction,1-DE      Related article
cotyledon      soluble fraction,1-DE      Related article
flower      SDS fraction,1-DE      Related article
flower      soluble fraction,1-DE      Related article
flower bud      SDS fraction,1-DE      Related article
juvenile leaf      SDS fraction,1-DE      Related article
pollen      combined fractions, 1-DE      Related article
pollen      soluble fraction, 1-DE      Related article
pollen      urea fraction, 1-DE      Related article
pollen      cyclohexane fraction, 1-DE      Related article
pollen      detergent fraction, 1-DE      Related article
pollen      urea total extract, 1-DE      Related article
pollen      total extract, ICAT labelling, avidin affinity flow through      Related article
root      soluble fraction,1-DE      Related article
root      SDS fraction,1-DE      Related article
seed      detergent fraction,1-DE      Related article
seed      urea fraction,1-DE      Related article
seed      soluble fraction,1-DE      Related article
silique      urea fraction,1-DE      Related article
silique      soluble fraction,1-DE      Related article
silique      detergent fraction,1-DE      Related article
shoot      Phosphopeptide enriched fraction: SDS fraction of A. thaliana shoots; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
shoot      Flow through fraction: SDS fraction of A. thaliana shoots; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
shoot      Flow through fraction: soluble fraction of A. thaliana shoots; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: SDS fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: SDS fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Flow through fraction: SDS fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchae; IMAC affinity chromatography ng      Related article
rosette      Flow through fraction: SDS fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: Soluble fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: Soluble fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Flow through fraction: Soluble fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
rosette      Flow through fraction: Soluble fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
Representative Gene Model Description
AT3G02090.1:MPPBETA; FUNCTIONS IN: metalloendopeptidase activity, catalytic activity, zinc ion binding, metal ion binding; INVOLVED IN: proteolysis; LOCATED IN: in 11 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M16, zinc-binding site (InterPro:IPR001431), Peptidase M16, C-terminal (InterPro:IPR007863), Peptidase M16, N-terminal (InterPro:IPR011765), Metalloenzyme, LuxS/M16 peptidase-like, metal-binding (InterPro:IPR011249), Peptidase M16, core (InterPro:IPR011237); BEST Arabidopsis thaliana protein match is: mitochondrial processing peptidase alpha subunit, putative (TAIR:AT1G51980.1); Has 8505 Blast hits to 8184 proteins in 1317 species: Archae - 16; Bacteria - 4776; Metazoa - 828; Fungi - 501; Plants - 202; Viruses - 3; Other Eukaryotes - 2179 (source: NCBI BLink).

AT3G02090.2:MPPBETA; FUNCTIONS IN: metalloendopeptidase activity, zinc ion binding, catalytic activity, metal ion binding; INVOLVED IN: proteolysis; LOCATED IN: in 11 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M16, zinc-binding site (InterPro:IPR001431), Peptidase M16, C-terminal (InterPro:IPR007863), Peptidase M16, N-terminal (InterPro:IPR011765), Metalloenzyme, LuxS/M16 peptidase-like, metal-binding (InterPro:IPR011249), Peptidase M16, core (InterPro:IPR011237); BEST Arabidopsis thaliana protein match is: mitochondrial processing peptidase alpha subunit, putative (TAIR:AT1G51980.1); Has 8457 Blast hits to 8139 proteins in 1315 species: Archae - 16; Bacteria - 4766; Metazoa - 826; Fungi - 501; Plants - 201; Viruses - 3; Other Eukaryotes - 2144 (source: NCBI BLink).

Database cross-references
TAIR Gene: AT3G02090;
IPI: IPI00539775; IPI00530627;
UniParc: UPI000000BD40; UPI0000196AC4;
REFSEQ_PROVISIONAL: NP_186858.1; NP_850500.1;
KEGG: AT3G02090;

GSPannotationmethodsrelated
AT3G16890(PPR40)PPR40 (PENTATRICOPEPTIDE (PPR) DOMAIN PROTEIN 40)text mining 18305213(co-fractionation)
AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT3G16890(PPR40)PPR40 (PENTATRICOPEPTIDE (PPR) DOMAIN PROTEIN 40)text mining 18305213(Co-fractionation)
AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21952135(yeast-2-hybrid)
AT5G09230(SRT2)SRT2 (SIRTUIN 2); DNA binding / NAD or NADH binding / NAD-dependent histone deacetylase/ zinc ion bindingtext mining 24424322(Affinity Capture-MS)
AT3G09250DNA binding / nucleasetext mining 21798944(yeast-2-hybrid)
AT5G03240(UBQ3)UBQ3 (POLYUBIQUITIN 3); protein bindingtext mining 19429840(Affinity Capture-MS)

 

Predicted
Functional Partners
annotationTotal
AT5G16420pentatricopeptide (PPR) repeat-containing protein
AT1G51980mitochondrial processing peptidase alpha subunit, putative
AT1G02410cytochrome c oxidase assembly protein CtaG / Cox11 family
AT1G03090No related data.
AT1G03360No related data.
AT1G03860No related data.
AT1G20350No related data.
AT1G22840No related data.
AT1G24510T-complex protein 1 epsilon subunit, putative / TCP-1-epsilon, putative / chaperonin, putative
AT1G36160No related data.
AT1G52980GTP-binding family protein
AT1G55250No related data.
AT1G55900No related data.
AT1G56070No related data.
AT1G62850translation release factor
AT1G69523UbiE/COQ5 methyltransferase family protein
AT1G72370No related data.
AT1G7405060S ribosomal protein L6 (RPL6C)
AT1G76030vacuolar ATP synthase subunit B / V-ATPase B subunit / vacuolar proton pump B subunit / V-ATPase 57 kDa subunit
AT1G7794060S ribosomal protein L30 (RPL30B)
AT1G80680No related data.
AT2G07727cytochrome b (MTCYB) (COB) (CYTB)
AT2G0999040S ribosomal protein S16 (RPS16A)
AT2G18020No related data.
AT2G20360binding / catalytic/ coenzyme binding
AT2G21790No related data.
AT2G23150No related data.
AT2G25355exonuclease-related
AT2G33980No related data.
AT2G36070No related data.
AT2G37410No related data.
AT2G41670GTP-binding family protein
AT2G44950No related data.
AT3G02530chaperonin, putative
AT3G03060ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding
AT3G03960chaperonin, putative
AT3G08580No related data.
AT3G09700DNAJ heat shock N-terminal domain-containing protein
AT3G11830chaperonin, putative
AT3G17465No related data.
AT3G17910No related data.
AT3G18190chaperonin, putative
AT3G18600DEAD/DEAH box helicase, putative
AT3G23990No related data.
AT3G25660glutamyl-tRNA(Gln) amidotransferase, putative
AT3G44110No related data.
AT3G5387040S ribosomal protein S3 (RPS3B)
AT3G58510DEAD box RNA helicase, putative (RH11)
AT3G59280No related data.
AT3G62600No related data.
AT4G03240No related data.
AT4G10040No related data.
AT4G17300No related data.
AT4G22310hypothetical protein
AT4G24190No related data.
AT4G26870aspartyl-tRNA synthetase, putative / aspartate--tRNA ligase, putative
AT4G28060cytochrome c oxidase subunit 6b, putative
AT4G28390No related data.
AT4G28510No related data.
AT4G32470ubiquinol-cytochrome C reductase complex 14 kDa protein, putative
AT4G37130hydroxyproline-rich glycoprotein family protein
AT4G37830cytochrome c oxidase-related
AT5G01340mitochondrial substrate carrier family protein
AT5G05780No related data.
AT5G08670ATP binding / hydrogen ion transporting ATP synthase, rotational mechanism
AT5G08680ATP synthase beta chain, mitochondrial, putative
AT5G13070MSF1-like family protein
AT5G13430ubiquinol-cytochrome C reductase iron-sulfur subunit, mitochondrial, putative / Rieske iron-sulfur protein, putative
AT5G13440ubiquinol-cytochrome C reductase iron-sulfur subunit, mitochondrial, putative / Rieske iron-sulfur protein, putative
AT5G13450ATP synthase delta chain, mitochondrial, putative / H(+)-transporting two-sector ATPase, delta (OSCP) subunit, putative
AT5G13490No related data.
AT5G13570No related data.
AT5G15910dehydrogenase-related
AT5G1838040S ribosomal protein S16 (RPS16C)
AT5G20890chaperonin, putative
AT5G26360chaperonin, putative
AT5G26830threonyl-tRNA synthetase / threonine--tRNA ligase (THRRS)
AT5G40770No related data.
AT5G40810cytochrome c1, putative
AT5G45940No related data.
AT5G48030No related data.
AT5G48600No related data.
AT5G51220ubiquinol-cytochrome C chaperone family protein
AT5G56030No related data.
AT5G56090No related data.
AT5G57815cytochrome c oxidase subunit 6b, putative
AT5G63680pyruvate kinase, putative
AT5G65900DEAD/DEAH box helicase, putative
AT5G67330No related data.
ATCG00065No related data.
ATCG00160No related data.
ATCG00830No related data.
ATCG00905No related data.
ATCG01230No related data.
ATCG01310No related data.
ATMG00160No related data.
ATMG00220No related data.
ATMG00730No related data.
ATMG00980No related data.
ATMG01190No related data.
ATMG01360No related data.

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
What does the displayed number mean when your mouse moved over a certain icon?(LR)