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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:MYB2  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT2G47190MYB2GSP:1 PPI:2MYB2 (MYB DOMAIN PROTEIN 2); DNA binding / calmodulin binding / transcription activator/ transcription factor.
Subcellar localization
nucleus: Pubmed12444417;
Representative Gene Model Description
AT2G47190.1:MYB DOMAIN PROTEIN 2 (MYB2); FUNCTIONS IN: transcription factor activity, calmodulin binding, transcription activator activity, DNA binding; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-type HTH DNA-binding domain (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: AtMYB78 (myb domain protein 78); DNA binding / transcription factor (TAIR:AT5G49620.1); Has 6187 Blast hits to 5754 proteins in 351 species: Archae - 0; Bacteria - 0; Metazoa - 607; Fungi - 288; Plants - 3719; Viruses - 4; Other Eukaryotes - 1569 (source: NCBI BLink).

Database cross-references
TAIR Gene: AT2G47190;
IPI: IPI00522511;
UniParc: UPI00000A4CE9;
REFSEQ_PROVISIONAL: NP_182241.1;
KEGG: AT2G47190;

GSPannotationmethodsrelated
AT1G32640(MYC2)MYC2; DNA binding / transcription activator/ transcription factortext mining 12509522(Phenotypic Enhancement)

 

Predicted
Functional Partners
annotationTotal
AT3G06490No related data.

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
What does the displayed number mean when your mouse moved over a certain icon?(LR)


Transcriptional Regulation

Transcription factorTarget geneDetail infoRelated Artical
SEPALLATA3[AT1G24260]AT2G47190No detail info. 19385720
AtMYB2[AT2G47190]AT1G77120 Relationship:Activation 9611167
AtMYB2[AT2G47190]AT5G25610 Relationship:Activation 12509522
AtMYB2[AT2G47190]AT5G25610TFBS:CTAACCA 9368419

 

TFFamilyConfidenceDetails
AGMADSLAT4G18960
AGL1MADSLAT3G58780
AGL3MADSHAT2G03710
ARR10GARPLAT4G31920
ATHB1HD-ZIPHAT3G01470
ID1C2H2(Zn)LAT1G25250
RAV1(2)AP2/EREBPLAT1G13260
TGA1bZIPHAT5G65210

Related PPIs for TFs
TF1TF2PPI
AT4G18960AT3G58780GO