Home Contact Sitemap

AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:AT2G47090  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT2G47090AT2G47090GSP:3 PPI:3nucleic acid binding / protein binding / zinc ion binding.
Representative Gene Model Description
AT2G47090.1:nucleic acid binding / protein binding / zinc ion binding; FUNCTIONS IN: protein binding, zinc ion binding, nucleic acid binding; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger (C2H2 type) family protein (TAIR:AT3G62240.1); Has 6659 Blast hits to 1471 proteins in 272 species: Archae - 0; Bacteria - 928; Metazoa - 1250; Fungi - 334; Plants - 64; Viruses - 26; Other Eukaryotes - 4057 (source: NCBI BLink).

Database cross-references
TAIR Gene: AT2G47090;
IPI: IPI00537032;
UniParc: UPI00005DC2DD;
REFSEQ_PROVISIONAL: NP_566094.2;
KEGG: AT2G47090;

GSPannotationmethodsrelated
AT3G18130(RACK1C_AT)RACK1C_AT (RECEPTOR FOR ACTIVATED C KINASE 1 C); nucleotide bindingtext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT3G18130(RACK1C_AT)RACK1C_AT (RECEPTOR FOR ACTIVATED C KINASE 1 C); nucleotide bindingtext mining 21952135(yeast-2-hybrid)
AT5G03240(UBQ3)UBQ3 (POLYUBIQUITIN 3); protein bindingtext mining 23667124(Affinity Capture-MS)