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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:AT2G45050  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT2G45050AT2G45050GSP:0 PPI:1zinc finger (GATA type) family protein.
Subcellar localization
nucleus: Pubmed12444417;
Representative Gene Model Description
AT2G45050.1:zinc finger (GATA type) family protein; FUNCTIONS IN: transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: leaf lamina base, petal, root, carpel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Transcription factor, GATA, plant (InterPro:IPR016679), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: zinc finger (GATA type) family protein (TAIR:AT3G60530.1); Has 1016 Blast hits to 999 proteins in 136 species: Archae - 0; Bacteria - 0; Metazoa - 96; Fungi - 438; Plants - 427; Viruses - 3; Other Eukaryotes - 52 (source: NCBI BLink).

Related Mutant  
    M2613 Related gene:AT2G45050; AT2G45060; AT2G45070;
    Method:T-DNA insertion
    Phenotype:leaves,narrow|General,files|Rosette,epinastic|Rosette,others|Rosette,leaves|Silique,short|Silique,thin|leaves,epinastic
    Related PO:leaf  PO:0009025    leaf whorl  PO:0008034    rosette leaf  PO:0000014    leaf whorl  PO:0008034    fruit  PO:0020107          
    Related Datasource Link:Riken database
    *

    Database cross-references
    TAIR Gene: AT2G45050;
    KEGG: AT2G45050;

    Predicted
    Functional Partners
    annotationTotal
    AT4G36240zinc finger (GATA type) family protein

    O: Ortholog interaction datasets
    G: Shared biological function:Go Ontology
    E: Co-expression
    F: Gene fusion method
    N: Gene neighbors method
    P: Phylogenetic profile method
    D: Enriched domain pair
    What does the displayed number mean when your mouse moved over a certain icon?(LR)


    Transcriptional Regulation

    Transcription factorTarget geneDetail infoRelated Artical
    SEPALLATA3[AT1G24260]AT2G45050No detail info. 19385720

     

    TFFamilyConfidenceDetails
    AGL15MADSLAT5G13790
    HY5bZIPLAT5G11260
    PIF3(2)bHLHLAT1G09530
    RAV1(2)AP2/EREBPHAT1G13260
    TGA1bZIPLAT5G65210

    Related PPIs for TFs
    TF1TF2PPI
    AT5G11260AT1G09530GO