Home Contact Sitemap

AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:LHB1B2  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT2G34420LHB1B2GSP:6 PPI:13LHB1B2; chlorophyll binding.
Subcellar localization
plastid: Pubmed14729914;
Related organ
juvenile leaf      SDS fraction,1-DE      Related article
rosette      Phosphopeptide enriched fraction: Soluble fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
Representative Gene Model Description
AT2G34420.1:LHB1B2; FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, light harvesting in photosystem II, photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: cotyledon, guard cell, juvenile leaf, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: CAB1 (CHLOROPHYLL A/B BINDING PROTEIN 1); chlorophyll binding (TAIR:AT1G29930.1); Has 1799 Blast hits to 1719 proteins in 194 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 1555; Viruses - 0; Other Eukaryotes - 242 (source: NCBI BLink).

Related KEGG pathway    
Metabolic Pathways
   |----------Energy Metabolism
   |--------------------Photosynthesis - antenna proteinsLink to keggView overall Pathway
Database cross-references
TAIR Gene: AT2G34420;
IPI: IPI00530785;
UniParc: UPI00000AC5D7;
REFSEQ_PROVISIONAL: NP_565786.1;
KEGG: AT2G34420;

GSPannotationmethodsrelated
AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21952135(yeast-2-hybrid)
AT1G80670transducin family protein / WD-40 repeat family proteintext mining 21189294(Affinity Capture-MS)
AT3G19220(SCO2)SCO2 (SNOWY COTYLEDON 2); protein disulfide isomerasetext mining 22040291(PCA)
AT3G47620(TCP14)No related data.text mining 21798944(yeast-2-hybrid)
AT2G41620nucleoporin interacting component family proteintext mining 21189294(Affinity Capture-MS)

 

Predicted
Functional Partners
annotationTotal
AT2G05100No related data.
AT3G47470No related data.
AT2G05070No related data.
AT5G54270No related data.
AT4G11910hypothetical protein
AT5G10450No related data.
AT2G34430No related data.

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
What does the displayed number mean when your mouse moved over a certain icon?(LR)