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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:ADS2  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT2G31360ADS2GSP:36 PPI:61ADS2 (16:0Delta9 Arabidopsis desaturase 2); oxidoreductase.
Related organ
flower bud      SDS fraction,1-DE      Related article
silique      detergent fraction,1-DE      Related article
Representative Gene Model Description
AT2G31360.1:16:0Delta9 Arabidopsis desaturase 2 (ADS2); FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: lipid metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid desaturase, type 1, core (InterPro:IPR015876), Fatty acid desaturase, type 1 (InterPro:IPR005804); BEST Arabidopsis thaliana protein match is: ADS1 (DELTA 9 DESATURASE 1); oxidoreductase (TAIR:AT1G06080.1); Has 2720 Blast hits to 2720 proteins in 595 species: Archae - 0; Bacteria - 1082; Metazoa - 692; Fungi - 150; Plants - 71; Viruses - 3; Other Eukaryotes - 722 (source: NCBI BLink).

Related Mutant  
    M5269 Related gene:AT2G31360;
    Method:NULL
    Phenotype:ADS2 is involved in cold acclimation or chilling tolerance, display reduced freezing tolerance. At 23掳C, all four ads2 mutant lines grew normally and there were no visible growth defects compared with the wild type (Figures 2A to 2E). At 6掳C, wild-type Arabidopsis plants were not injured by cold exposure and continued to grow and develop during prolonged incubation, although the growth rate was significantly reduced relative to at 23掳C. However, the growth rate of ads2 mutants was significantly lower than the wild type at 6掳C (Figures 2F to 2J).The retarded growth phenotype became severe with prolonged exposure to low temperature, especially after reproductive transition (Figures 2K to 2O).(PMID: 23585650)|All four ads2 mutants were sterile, while the wild type produced abundant, viable seeds at 6掳C (Figure 3A).(PMID: 23585650)
    Related PO:plant structure development stage  PO:0009012    
    Related Datasource Link:
    *

    Database cross-references
    Entrez Gene: p;
    TAIR Gene: AT2G31360;
    IPI: p;
    UniProtKB/TrEMBL: p;
    UniParc: p;
    REFSEQ_PROVISIONAL: p;
    KEGG: AT2G31360;

    GSPannotationmethodsrelated
    AT5G56750Ndr family proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
    AT3G13175hypothetical proteintext mining 24833385(PCA)
    AT1G17280(UBC34)UBC34 (ubiquitin-conjugating enzyme 34); ubiquitin-protein ligasetext mining 24833385(PCA)
    AT1G31812(ACBP6)ACBP6 (acyl-CoA-binding protein 6); acyl-CoA binding / phosphatidylcholine bindingtext mining 24833385(PCA)
    AT1G59730(TH7)No related data.text mining 24833385(PCA)
    AT1G78970(LUP1)LUP1 (LUPEOL SYNTHASE 1); beta-amyrin synthase/ lupeol synthasetext mining 24833385(PCA)
    AT5G56750(NDL1)No related data.text mining 21952135(yeast-2-hybrid)
    AT4G35860(GB2)No related data.text mining 24833385(PCA)
    AT4G30850(HHP2)HHP2 (HEPTAHELICAL TRANSMEMBRANE PROTEIN2); receptortext mining 24833385(PCA)
    AT1G14360(UTR3)UTR3 (UDP-GALACTOSE TRANSPORTER 3); pyrimidine nucleotide sugar transmembrane transportertext mining 24833385(PCA)
    AT4G23400(PIP1;5)PIP1;5 (PLASMA MEMBRANE INTRINSIC PROTEIN 1;5); water channeltext mining 24833385(PCA)
    AT3G62560GTP-binding protein, putativetext mining 24833385(PCA)
    AT4G37370(CYP81D8)CYP81D8; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen bindingtext mining 24833385(PCA)
    AT4G37680(HHP4)HHP4 (heptahelical protein 4); receptortext mining 24833385(PCA)
    AT3G02290zinc finger (C3HC4-type RING finger) family proteintext mining 24833385(PCA)
    AT2G22425peptidasetext mining 24833385(PCA)
    AT1G76185hypothetical proteintext mining 24833385(PCA)
    AT3G17210(HS1)HS1 (HEAT STABLE PROTEIN 1)text mining 24833385(PCA)
    AT1G35720(ANNAT1)ANNAT1 (ANNEXIN ARABIDOPSIS 1); ATP binding / calcium ion binding / calcium-dependent phospholipid binding / copper ion binding / peroxidase/ protein homodimerizationtext mining 24833385(PCA)
    AT4G11860hypothetical proteintext mining 24833385(PCA)
    AT2G41705camphor resistance CrcB family proteintext mining 24833385(PCA)
    AT1G64900(CYP89A2)CYP89A2 (CYTOCHROME P450 89A2); electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen bindingtext mining 24833385(PCA)
    AT1G78380(GSTU19)No related data.text mining 24833385(PCA)
    AT4G23010(UTR2)UDP-galactose transporter-relatedtext mining 24833385(PCA)
    AT3G17000(UBC32)UBC32 (ubiquitin-conjugating enzyme 32); ubiquitin-protein ligasetext mining 24833385(PCA)
    AT3G55440(TPI)TPI (TRIOSEPHOSPHATE ISOMERASE); triose-phosphate isomerasetext mining 24833385(PCA)
    AT2G26180(IQD6)IQD6 (IQ-domain 6); calmodulin bindingtext mining 24833385(PCA)
    AT1G80890hypothetical proteintext mining 24833385(PCA)
    AT3G12180cornichon family proteintext mining 24833385(PCA)
    AT5G35460hypothetical proteintext mining 24833385(PCA)
    AT5G42420transporter-relatedtext mining 24833385(PCA)
    AT1G34640hypothetical proteintext mining 24833385(PCA)
    AT2G24180(CYP71B6)CYP71B6 (CYTOCHROME P450 71B6); electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen bindingtext mining 24833385(PCA)
    AT1G31420(FEI1)FEI1 (FEI 1); ATP binding / kinase/ protein serine/threonine kinasetext mining 24833385(PCA)
    AT5G06320(NHL3)NHL3text mining 24833385(PCA)
    AT4G03560(TPC1)No related data.text mining 24833385(PCA)

     

    Predicted
    Functional Partners
    annotationTotal
    ATCG01310No related data.
    ATCG00830No related data.
    AT5G60620phospholipid/glycerol acyltransferase family protein
    AT5G27600No related data.
    AT4G34490No related data.
    AT4G31490coatomer beta subunit, putative / beta-coat protein, putative / beta-COP, putative
    AT4G10790UBX domain-containing protein
    AT3G53230cell division cycle protein 48, putative / CDC48, putative
    AT3G06470GNS1/SUR4 membrane family protein
    AT3G02580No related data.
    AT2G47970NPL4 family protein
    AT2G34770No related data.
    AT2G32720No related data.
    AT2G29390No related data.
    AT2G04350long-chain-fatty-acid--CoA ligase family protein / long-chain acyl-CoA synthetase family protein (LACS8)
    AT1G77590No related data.
    AT1G51260No related data.
    AT1G10630No related data.
    AT3G15870oxidoreductase
    AT1G06100fatty acid desaturase family protein
    AT1G06350fatty acid desaturase family protein
    AT1G06090fatty acid desaturase family protein
    AT1G06360fatty acid desaturase family protein
    AT1G06120fatty acid desaturase family protein
    AT1G06080No related data.

    O: Ortholog interaction datasets
    G: Shared biological function:Go Ontology
    E: Co-expression
    F: Gene fusion method
    N: Gene neighbors method
    P: Phylogenetic profile method
    D: Enriched domain pair
    What does the displayed number mean when your mouse moved over a certain icon?(LR)


    Transcriptional Regulation

    Transcription factorTarget geneDetail infoRelated Artical
    SEPALLATA3[AT1G24260]AT2G31360No detail info. 19385720

     

    TFFamilyConfidenceDetails
    AGL15MADSLAT5G13790
    AGL2MADSLAT5G15800
    AGL3MADSHAT2G03710
    ARR10GARPLAT4G31920
    ATHB1HD-ZIPHAT3G01470
    GT-3bTrihelixLAT5G01380
    ID1C2H2(Zn)LAT1G25250
    RAV1(2)AP2/EREBPHAT1G13260