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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:PSBW  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT2G30570PSBWGSP:2 PPI:2PSBW (PHOTOSYSTEM II REACTION CENTER W).
Subcellar localization
plastid: Pubmed14729914;
Related complex
Photosystem II
Representative Gene Model Description
AT2G30570.1:PHOTOSYSTEM II REACTION CENTER W (PSBW); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II protein PsbW, class 2 (InterPro:IPR009806); Has 54 Blast hits to 54 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).

Related KEGG pathway    
Metabolic Pathways
   |----------Energy Metabolism
   |--------------------PhotosynthesisLink to keggView overall Pathway
Predicted Mutant Phenotypes
chlorenchyma    PO:0005426;    
Database cross-references
TAIR Gene: AT2G30570;
IPI: IPI00529146;
UniParc: UPI00000AC083;
REFSEQ_PROVISIONAL: NP_180615.1;
KEGG: AT2G30570;

GSPannotationmethodsrelated
AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21952135(yeast-2-hybrid)

 


Transcriptional Regulation

Transcription factorTarget geneDetail infoRelated Artical
HY5[AT5G11260]AT2G30570 Relationship:Induced Detected Organs:Cotyledon 17337630
HY5 [AT5G11260]AT2G30570 Relationship:Induced Detected Organs:Hypocotyl 17337630
HY5 [AT5G11260]AT2G30570 Relationship:Induced Detected Organs:Root 17337630

 

TFFamilyConfidenceDetails
AGL3MADSLAT2G03710
CDC5MYBLAT1G09770
RAV1(2)AP2/EREBPHAT1G13260