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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:ftsh3  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT2G29080ftsh3GSP:5 PPI:84ftsh3 (FtsH protease 3); ATP-dependent peptidase/ ATPase.
Subcellar localization
mitochondrion: Pubmed14630971; plastid: Pubmed15322131;
Related organ
carpel      detergent fraction,1-DE      Related article
cell suspension culture      full cell extract,1-DE      Related article
cell suspension culture      SDS fraction,1-DE      Related article
cell suspension culture      detergent fraction,1-DE      Related article
cell suspension culture      urea fraction,1-DE      Related article
cell suspension culture      soluble fraction,Schagger 1-DE      Related article
flower      SDS fraction,1-DE      Related article
flower bud      SDS fraction,1-DE      Related article
juvenile leaf      SDS fraction,1-DE      Related article
pollen      urea fraction, 1-DE      Related article
root      SDS fraction,1-DE      Related article
seed      urea fraction,1-DE      Related article
silique      urea fraction,1-DE      Related article
silique      detergent fraction,1-DE      Related article
rosette      Phosphopeptide enriched fraction: SDS fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: SDS fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Flow through fraction: SDS fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchae; IMAC affinity chromatography ng      Related article
rosette      Phosphopeptide enriched fraction: Soluble fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
Representative Gene Model Description
AT2G29080.1:FtsH protease 3 (ftsh3); FUNCTIONS IN: ATP-dependent peptidase activity, ATPase activity; INVOLVED IN: proteolysis, protein catabolic process; LOCATED IN: mitochondrion, chloroplast thylakoid membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase M41, FtsH extracellular (InterPro:IPR011546); BEST Arabidopsis thaliana protein match is: ftsh10 (FtsH protease 10); ATP binding / ATPase/ metalloendopeptidase/ nucleoside-triphosphatase/ nucleotide binding / zinc ion binding (TAIR:AT1G07510.1); Has 28991 Blast hits to 27443 proteins in 1885 species: Archae - 910; Bacteria - 9394; Metazoa - 4014; Fungi - 2449; Plants - 1742; Viruses - 21; Other Eukaryotes - 10461 (source: NCBI BLink).

Database cross-references
TAIR Gene: AT2G29080;
IPI: IPI00525466;
UniParc: UPI000000BD9A;
REFSEQ_PROVISIONAL: NP_850129.1;
KEGG: AT2G29080;

GSPannotationmethodsrelated
AT1G48630(RACK1B_AT)RACK1B_AT (RECEPTOR FOR ACTIVATED C KINASE 1 B); nucleotide bindingtext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT3G18130(RACK1C_AT)RACK1C_AT (RECEPTOR FOR ACTIVATED C KINASE 1 C); nucleotide bindingtext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT3G18130(RACK1C_AT)RACK1C_AT (RECEPTOR FOR ACTIVATED C KINASE 1 C); nucleotide bindingtext mining 21952135(yeast-2-hybrid)
AT1G48630(RACK1B_AT)RACK1B_AT (RECEPTOR FOR ACTIVATED C KINASE 1 B); nucleotide bindingtext mining 21952135(yeast-2-hybrid)
AT1G07510(ftsh10)ftsh10 (FtsH protease 10); ATP binding / ATPase/ metalloendopeptidase/ nucleoside-triphosphatase/ nucleotide binding / zinc ion bindingtext mining 20172857(Affinity Capture-Western)

 

Predicted
Functional Partners
annotationTotal
AT5G42270No related data.
AT3G09840No related data.
AT1G11290No related data.
AT4G39280phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative
AT4G33100hypothetical protein
AT4G29510No related data.
AT4G29130No related data.
AT4G28510No related data.
AT4G27585band 7 family protein
AT4G24190No related data.
AT4G16700No related data.
AT4G11640No related data.
AT4G07410transducin family protein / WD-40 repeat family protein
AT4G01320No related data.
AT3G61710autophagy protein Apg6 family
AT3G58140phenylalanyl-tRNA synthetase class IIc family protein
AT3G57090No related data.
AT3G55070hypothetical protein
AT3G44190pyridine nucleotide-disulphide oxidoreductase family protein
ATMG01190No related data.
ATMG00220No related data.
AT5G62050No related data.
AT5G57490No related data.
AT5G56030No related data.
AT5G52640No related data.
AT5G47040No related data.
AT5G43010No related data.
AT5G42740glucose-6-phosphate isomerase, cytosolic (PGIC)
AT5G40770No related data.
AT5G26860No related data.
AT5G2029040S ribosomal protein S8 (RPS8A)
AT5G2000026S proteasome AAA-ATPase subunit, putative
AT5G19320No related data.
AT5G13780GCN5-related N-acetyltransferase, putative
AT5G13430ubiquinol-cytochrome C reductase iron-sulfur subunit, mitochondrial, putative / Rieske iron-sulfur protein, putative
AT5G08680ATP synthase beta chain, mitochondrial, putative
AT5G08670ATP binding / hydrogen ion transporting ATP synthase, rotational mechanism
AT4G39460No related data.
AT2G33840tRNA synthetase class I (W and Y) family protein
AT2G33040ATP synthase gamma chain, mitochondrial (ATPC)
AT2G26140No related data.
AT2G2045060S ribosomal protein L14 (RPL14A)
AT2G2014026S protease regulatory complex subunit 4, putative
AT2G17370No related data.
AT2G14120No related data.
AT2G07727cytochrome b (MTCYB) (COB) (CYTB)
AT1G78770cell division cycle family protein
AT1G75560zinc knuckle (CCHC-type) family protein
AT1G64520No related data.
AT1G62850translation release factor
AT1G53530signal peptidase I family protein
AT1G48850No related data.
AT1G23260No related data.
AT1G20350No related data.
AT1G13980No related data.
AT1G07810No related data.
AT1G03860No related data.
AT1G01910anion-transporting ATPase, putative
AT3G27280No related data.
AT3G20000No related data.
AT3G19170No related data.
AT3G16785No related data.
AT3G15352No related data.
AT3G11710No related data.
AT3G10920No related data.
AT3G10050No related data.
AT3G09640No related data.
AT3G05790No related data.
AT3G05530No related data.
AT3G03420Ku70-binding family protein
AT2G46470No related data.
AT2G44950No related data.
AT2G38905hydrophobic protein, putative / low temperature and salt responsive protein, putative
AT2G38130No related data.
AT2G37410No related data.
AT2G37250No related data.
AT1G07510No related data.
AT1G50250No related data.
AT1G06430No related data.

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
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