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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:CKS2  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT2G27970CKS2GSP:66 PPI:196CKS2 (CDK-subunit 2); cyclin-dependent protein kinase/ cyclin-dependent protein kinase regulator.
Related organ
cell suspension culture      full cell extract,1-DE      Related article
cell suspension culture      soluble fraction,1-DE      Related article
cell suspension culture      urea fraction,1-DE      Related article
cell suspension culture      triton fraction,Schagger 1-DE      Related article
cell suspension culture      soluble fraction,Schagger 1-DE      Related article
Representative Gene Model Description
AT2G27970.1:CDK-subunit 2 (CKS2); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity, cyclin-dependent protein kinase activity; INVOLVED IN: cell cycle; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin-dependent kinase, regulatory subunit (InterPro:IPR000789); BEST Arabidopsis thaliana protein match is: CKS1 (CYCLIN-DEPENDENT KINASE-SUBUNIT 1); cyclin-dependent protein kinase/ protein binding (TAIR:AT2G27960.1); Has 499 Blast hits to 499 proteins in 145 species: Archae - 0; Bacteria - 0; Metazoa - 246; Fungi - 99; Plants - 70; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink).

Database cross-references
TAIR Gene: AT2G27970;
IPI: IPI00525405;
UniParc: UPI00000A91F3;
REFSEQ_PROVISIONAL: NP_180364.1;
KEGG: AT2G27970;

GSPannotationmethodsrelated
AT4G34160(CYCD3;1)CYCD3;1 (CYCLIN D3;1); cyclin-dependent protein kinase regulator/ protein bindingtext mining 17426018(affinity capture)
AT3G48750(CDC2)CDC2 (CELL DIVISION CONTROL 2); cyclin-dependent protein kinase/ kinase/ protein binding / protein kinasetext mining 17426018(affinity capture)
AT3G54180(CDKB1;1)CDKB1;1 (CYCLIN-DEPENDENT KINASE B1;1); cyclin-dependent protein kinase/ kinase/ protein bindingtext mining 17426018(affinity capture)
AT5G56750Ndr family proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT3G48750(CDC2)CDC2 (CELL DIVISION CONTROL 2); cyclin-dependent protein kinase/ kinase/ protein binding / protein kinasetext mining 17426018(*TAIR)
AT4G03270(CYCD6;1)CYCD6;1 (Cyclin D6;1); cyclin-dependent protein kinasetext mining 20407024(PCA)
AT5G48820(ICK6)ICK6 (INHIBITOR/INTERACTOR WITH CYCLIN-DEPENDENT KINASE); cyclin binding / cyclin-dependent protein kinase inhibitortext mining 20706207(Affinity Capture-MS)
AT5G10440(CYCD4;2)CYCD4;2 (cyclin d4;2); cyclin-dependent protein kinasetext mining 20706207(Affinity Capture-MS)
AT1G49620(ICK5)ICK5; cyclin binding / cyclin-dependent protein kinase inhibitortext mining 20407024(PCA)
AT5G65420(CYCD4;1)CYCD4;1 (CYCLIN D4;1); cyclin-dependent protein kinase regulatortext mining 20706207(Affinity Capture-MS)
AT4G11920(CCS52A2)CCS52A2; signal transducertext mining 20706207(Affinity Capture-MS)
AT3G50070(CYCD3;3)CYCD3;3 (CYCLIN D3;3); cyclin-dependent protein kinasetext mining 20706207(Affinity Capture-MS)
AT1G05805basic helix-loop-helix (bHLH) family proteintext mining 20706207(Affinity Capture-MS)
AT1G10690hypothetical proteintext mining 20706207(Affinity Capture-MS)
AT5G04470(SIM)SIM (SIAMESE); cyclin-dependent protein kinase inhibitortext mining 20706207(Affinity Capture-MS)
AT3G19150(KRP6)KRP6 (KIP-RELATED PROTEIN 6); cyclin binding / cyclin-dependent protein kinase inhibitortext mining 20407024(PCA)
AT5G13840(FZR3)FZR3 (FIZZY-RELATED 3); signal transducertext mining 20407024(PCA)
AT1G47230(CYCA3;4)cyclin, putativetext mining 20407024(PCA)
AT5G56750(NDL1)No related data.text mining 21952135(yeast-2-hybrid)
AT2G32710(KRP4)KRP4; cyclin binding / cyclin-dependent protein kinase inhibitortext mining 20407024(PCA)
AT3G24810(ICK3)ICK3; cyclin-dependent protein kinase inhibitortext mining 20407024(PCA)
AT1G47220(CYCA3;3)CYCA3;3 (Cyclin A3;3); cyclin-dependent protein kinase regulatortext mining 20706207(Affinity Capture-MS)
AT5G48820(ICK6)ICK6 (INHIBITOR/INTERACTOR WITH CYCLIN-DEPENDENT KINASE); cyclin binding / cyclin-dependent protein kinase inhibitortext mining 20407024(PCA)
AT2G22490(CYCD2;1)CYCD2;1 (Cyclin D2;1); cyclin-dependent protein kinase regulator/ protein bindingtext mining 20407024(PCA)
AT1G76540(CDKB2;1)CDKB2;1 (cyclin-dependent kinase B2;1); cyclin-dependent protein kinase/ kinase/ protein bindingtext mining 20706207(Affinity Capture-MS)
AT5G02420hypothetical proteintext mining 20706207(Affinity Capture-MS)
AT5G02220hypothetical proteintext mining 20706207(Affinity Capture-MS)
AT3G54180(CDKB1;1)CDKB1;1 (CYCLIN-DEPENDENT KINASE B1;1); cyclin-dependent protein kinase/ kinase/ protein bindingtext mining 20706207(Affinity Capture-MS)
AT4G28980(CAK1AT)cyclin-dependent kinase-activating kinase 1At / CDK-activating kinase 1At (CAK1)text mining 20407024(PCA)
AT4G14310hypothetical proteintext mining 20706207(PCA)
AT1G07500hypothetical proteintext mining 20706207(Affinity Capture-MS)
AT5G14170(CHC1)CHC1text mining 20706207(Affinity Capture-MS)
AT5G06150(CYC1BAT)CYC1BAT; cyclin-dependent protein kinase regulatortext mining 20706207(Affinity Capture-MS)
AT5G13840(FZR3)FZR3 (FIZZY-RELATED 3); signal transducertext mining 20706207(Affinity Capture-MS)
AT2G22490(CYCD2;1)CYCD2;1 (Cyclin D2;1); cyclin-dependent protein kinase regulator/ protein bindingtext mining 20706207(Affinity Capture-MS)
AT1G76310(CYCB2;4)CYCB2;4 (CYCLIN B2;4); cyclin-dependent protein kinase regulatortext mining 20706207(Affinity Capture-MS)
AT1G73690(CDKD1;1)CDKD1;1 (CYCLIN-DEPENDENT KINASE D1;1); ATP binding / kinase/ protein kinase/ protein serine/threonine kinasetext mining 20407024(PCA)
AT4G34160(CYCD3;1)CYCD3;1 (CYCLIN D3;1); cyclin-dependent protein kinase regulator/ protein bindingtext mining 20706207(Affinity Capture-MS)
AT3G50630(KRP2)KRP2 (KIP-RELATED PROTEIN 2); cyclin-dependent protein kinase inhibitor/ kinase inhibitor/ protein bindingtext mining 20706207(Affinity Capture-MS)
AT3G54180(CDKB1;1)CDKB1;1 (CYCLIN-DEPENDENT KINASE B1;1); cyclin-dependent protein kinase/ kinase/ protein bindingtext mining 20407024(yeast-2-hybrid)
AT5G27620(CYCH;1)CYCH;1 (CYCLIN H;1); cyclin-dependent protein kinase/ protein binding / protein kinasetext mining 20407024(PCA)
AT1G47230(CYCA3;4)cyclin, putativetext mining 20706207(Affinity Capture-MS)
AT5G65420(CYCD4;1)CYCD4;1 (CYCLIN D4;1); cyclin-dependent protein kinase regulatortext mining 20407024(PCA)
AT2G43140DNA binding / transcription factortext mining 20706207(Affinity Capture-MS)
AT1G66750(CAK4)CAK4 (CDK-ACTIVATING KINASE 4); kinase/ protein binding / protein serine/threonine kinasetext mining 20407024(PCA)
AT2G38620(CDKB1;2)CDKB1;2 (cyclin-dependent kinase B1;2); cyclin binding / kinase/ protein serine/threonine kinasetext mining 20706207(Affinity Capture-MS)
AT5G67260(CYCD3;2)CYCD3;2 (CYCLIN D3;2); cyclin-dependent protein kinasetext mining 20706207(Affinity Capture-MS)
AT2G32700(LUH)WD-40 repeat family proteintext mining 20706207(Affinity Capture-MS)
AT3G48160(DEL1)DEL1 (DP-E2F-LIKE 1); DNA binding / transcription factortext mining 20407024(PCA)
AT3G50630(KRP2)KRP2 (KIP-RELATED PROTEIN 2); cyclin-dependent protein kinase inhibitor/ kinase inhibitor/ protein bindingtext mining 20407024(PCA)
AT4G35620(CYCB2;2)CYCB2;2 (Cyclin B2;2); cyclin-dependent protein kinase regulatortext mining 20706207(Affinity Capture-MS)
AT3G22310(PMH1)PMH1 (PUTATIVE MITOCHONDRIAL RNA HELICASE 1); ATP-dependent helicase/ DNA binding / RNA bindingtext mining 20706207(Affinity Capture-MS)
AT5G43080(CYCA3;1)CYCA3;1 (Cyclin A3;1); cyclin-dependent protein kinase regulatortext mining 20706207(Affinity Capture-MS)
AT5G10440(CYCD4;2)CYCD4;2 (cyclin d4;2); cyclin-dependent protein kinasetext mining 20407024(PCA)
AT1G20930(CDKB2;2)CDKB2;2 (CYCLIN-DEPENDENT KINASE B2;2); cyclin-dependent protein kinase/ kinasetext mining 20407024(yeast-2-hybrid)
AT1G18040(CDKD1;3)CDKD1;3 (CYCLIN-DEPENDENT KINASE D1;3); kinase/ protein kinasetext mining 20407024(PCA)
AT5G02110(CYCD7;1)CYCD7;1 (CYCLIN D7;1); cyclin-dependent protein kinasetext mining 20706207(Affinity Capture-MS)
AT4G37630(CYCD5;1)CYCD5;1 (cyclin d5;1); cyclin-dependent protein kinasetext mining 20407024(PCA)
AT3G48750(CDC2)CDC2 (CELL DIVISION CONTROL 2); cyclin-dependent protein kinase/ kinase/ protein binding / protein kinasetext mining 25521792(Reconstituted Complex)
AT5G40460hypothetical proteintext mining 20706207(Affinity Capture-MS)
AT2G23430(ICK1)ICK1; cyclin-dependent protein kinase inhibitortext mining 20407024(FRET)
AT2G23430(ICK1)ICK1; cyclin-dependent protein kinase inhibitortext mining 20407024(PCA)
AT4G37630(CYCD5;1)CYCD5;1 (cyclin d5;1); cyclin-dependent protein kinasetext mining 20706207(Affinity Capture-MS)
AT4G14310hypothetical proteintext mining 20706207(Affinity Capture-MS)
AT3G10525(LGO)No related data.text mining 20706207(Affinity Capture-MS)
AT3G47930(GLDH)No related data.text mining 20706207(Affinity Capture-MS)

 

Predicted
Functional Partners
annotationTotal
AT1G02970No related data.
AT1G05000tyrosine specific protein phosphatase family protein
AT1G07270cell division control protein CDC6b, putative (CDC6b)
AT1G08780No related data.
AT1G10580transducin family protein / WD-40 repeat family protein
AT1G11890No related data.
AT1G11980No related data.
AT1G13950No related data.
AT1G16220protein phosphatase 2C family protein / PP2C family protein
AT1G17720No related data.
AT1G20200No related data.
AT1G20610No related data.
AT1G26480No related data.
AT1G34150tRNA pseudouridine synthase family protein
AT1G35440No related data.
AT1G47210No related data.
AT1G53750No related data.
AT1G54270No related data.
AT1G56450No related data.
AT1G59900No related data.
AT1G60740peroxiredoxin type 2, putative
AT1G63440No related data.
AT1G64350No related data.
AT1G65040protein binding / zinc ion binding
AT1G66740No related data.
AT1G7599026S proteasome regulatory subunit S3, putative (RPN3)
AT1G77720protein kinase family protein
AT1G78770cell division cycle family protein
AT1G80370No related data.
AT2G04550No related data.
AT2G20000No related data.
AT2G2014026S protease regulatory complex subunit 4, putative
AT2G20330transducin family protein / WD-40 repeat family protein
AT2G23450protein kinase family protein
AT2G27020No related data.
AT2G28390SAND family protein
AT2G31200No related data.
AT2G3616040S ribosomal protein S14 (RPS14A)
AT2G39800No related data.
AT2G42810No related data.
AT2G43750No related data.
AT2G43790No related data.
AT3G02820zinc knuckle (CCHC-type) family protein
AT3G03920Gar1 RNA-binding region family protein
AT3G05530No related data.
AT3G05790No related data.
AT3G06720No related data.
AT3G10700GHMP kinase family protein
AT3G11520No related data.
AT3G12110No related data.
AT3G12810No related data.
AT3G13920No related data.
AT3G13940DNA binding / DNA-directed RNA polymerase
AT3G16320No related data.
AT3G18580single-strand-binding family protein
AT3G19210No related data.
AT3G19760eukaryotic translation initiation factor 4A, putative / eIF-4A, putative / DEAD box RNA helicase, putative
AT3G20010SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein
AT3G20740No related data.
AT3G22480No related data.
AT3G27640transducin family protein / WD-40 repeat family protein
AT3G33520No related data.
AT3G44530No related data.
AT3G46000No related data.
AT3G46100No related data.
AT3G48150No related data.
AT3G49660transducin family protein / WD-40 repeat family protein
AT3G5258040S ribosomal protein S14 (RPS14C)
AT3G52960peroxiredoxin type 2, putative
AT3G55380No related data.
AT3G55610No related data.
AT3G57150No related data.
AT3G59760No related data.
AT3G61710autophagy protein Apg6 family
AT3G62240zinc finger (C2H2 type) family protein
AT4G00660DEAD/DEAH box helicase, putative
AT4G00720No related data.
AT4G02570No related data.
AT4G08960phosphotyrosyl phosphatase activator (PTPA) family protein
AT4G12620No related data.
AT4G14880No related data.
AT4G17300No related data.
AT4G19600No related data.
AT4G22285ubiquitin thiolesterase/ zinc ion binding
AT4G22910No related data.
AT4G26110No related data.
AT4G26720No related data.
AT4G26840No related data.
AT4G26870aspartyl-tRNA synthetase, putative / aspartate--tRNA ligase, putative
AT4G30890No related data.
AT4G33260No related data.
AT4G33270No related data.
AT4G38630No related data.
AT5G03415No related data.
AT5G10260No related data.
AT5G11200DEAD/DEAH box helicase, putative
AT5G19330armadillo/beta-catenin repeat family protein / BTB/POZ domain-containing protein
AT5G2029040S ribosomal protein S8 (RPS8A)
AT5G20850No related data.
AT5G23290No related data.
AT5G25380No related data.
AT5G26860No related data.
AT5G27570WD-40 repeat family protein
AT5G42190No related data.
AT5G45020hypothetical protein
AT5G45600No related data.
AT5G48630cyclin family protein
AT5G48640cyclin family protein
AT5G49510No related data.
AT5G49650xylulose kinase, putative
AT5G50320No related data.
AT5G52360No related data.
AT5G52640No related data.
AT5G55260No related data.
AT5G56030No related data.
AT5G56280No related data.
AT5G58230No related data.
AT5G58690phosphoinositide-specific phospholipase C family protein
AT5G59890No related data.
AT5G61150No related data.
AT5G61550protein kinase family protein
AT5G62310No related data.
AT5G63610No related data.
AT5G63650No related data.
AT5G65900DEAD/DEAH box helicase, putative
AT5G66850No related data.
AT5G67320No related data.
ATCG00750No related data.
AT2G27960No related data.
AT3G48750No related data.

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
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Transcriptional Regulation

TFFamilyConfidenceDetails
AGL1MADSLAT3G58780
ID1C2H2(Zn)LAT1G25250
RAV1(2)AP2/EREBPHAT1G13260