Home Contact Sitemap

AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:ATARD3  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT2G26400ATARD3GSP:9 PPI:15ATARD3 (ACIREDUCTONE DIOXYGENASE 3); acireductone dioxygenase [iron(II)-requiring]/ heteroglycan binding / metal ion binding.
Related organ
root      soluble fraction,1-DE      Related article
Representative Gene Model Description
AT2G26400.1:ACIREDUCTONE DIOXYGENASE 3 (ATARD3); FUNCTIONS IN: acireductone dioxygenase [iron(II)-requiring] activity, heteroglycan binding, metal ion binding; INVOLVED IN: methionine salvage; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acireductone dioxygenase, ARD (InterPro:IPR004313), Cupin, RmlC-type (InterPro:IPR011051), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: acireductone dioxygenase [iron(II)-requiring]/ metal ion binding (TAIR:AT4G14710.2); Has 1008 Blast hits to 1004 proteins in 301 species: Archae - 0; Bacteria - 334; Metazoa - 125; Fungi - 85; Plants - 390; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink).

Predicted Mutant Phenotypes
leaf apex    PO:0020137;    
Database cross-references
TAIR Gene: AT2G26400;
IPI: IPI00536386;
UniParc: UPI00000A93AC;
REFSEQ_PROVISIONAL: NP_180208.1;
KEGG: AT2G26400;

GSPannotationmethodsrelated
AT1G30230elongation factor 1-beta / EF-1-betatext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT1G05000tyrosine specific protein phosphatase family proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT4G26410hypothetical proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT5G03240(UBQ3)UBQ3 (POLYUBIQUITIN 3); protein bindingtext mining 18535787(Affinity Capture-MS)
AT1G30230elongation factor 1-beta / EF-1-betatext mining 21952135(yeast-2-hybrid)
AT1G05000tyrosine specific protein phosphatase family proteintext mining 21952135(yeast-2-hybrid)
AT4G26410hypothetical proteintext mining 21952135(yeast-2-hybrid)
AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21952135(yeast-2-hybrid)

 

Predicted
Functional Partners
annotationTotal
AT4G14710No related data.
AT1G13700glucosamine/galactosamine-6-phosphate isomerase family protein
AT3G06850No related data.
AT3G50670No related data.
AT5G43850No related data.
AT4G14716No related data.

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
What does the displayed number mean when your mouse moved over a certain icon?(LR)


Transcriptional Regulation

TFFamilyConfidenceDetails
AGL15MADSLAT5G13790
AGL3MADSHAT2G03710
ARR10GARPLAT4G31920
ATHB1HD-ZIPLAT3G01470
GT-3bTrihelixLAT5G01380
HY5bZIPLAT5G11260
MYB2MYBHAT2G47190
RAV1(2)AP2/EREBPHAT1G13260
TGA1bZIPHAT5G65210
WRKY18WRKY(Zn)HAT4G31800