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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:AT2G22880  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT2G22880AT2G22880GSP:6 PPI:6VQ motif-containing protein.
Representative Gene Model Description
AT2G22880.1:VQ motif-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, LP.10 ten leaves visible, LP.12 twelve leaves visible, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: VQ (InterPro:IPR008889); BEST Arabidopsis thaliana protein match is: VQ motif-containing protein (TAIR:AT4G37710.1); Has 17 Blast hits to 17 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

Related Mutant  
M4674 Related gene:AT2G22880;
Method:RNAi
Phenotype:inflorescence axis,PO:0020122;
Related PO:inflorescence axis  decreased number|inflorescence axis    
Related Datasource Link:agrikola database
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Database cross-references
Entrez Gene: i;
TAIR Gene: AT2G22880;
IPI: i;
UniProtKB/TrEMBL: i;
UniParc: i;
REFSEQ_PROVISIONAL: i;
KEGG: AT2G22880;

GSPannotationmethodsrelated
AT3G18130(RACK1C_AT)RACK1C_AT (RECEPTOR FOR ACTIVATED C KINASE 1 C); nucleotide bindingtext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT2G47260(WRKY23)WRKY23; transcription factortext mining 21798944(yeast-2-hybrid)
AT3G18130(RACK1C_AT)RACK1C_AT (RECEPTOR FOR ACTIVATED C KINASE 1 C); nucleotide bindingtext mining 21952135(yeast-2-hybrid)
AT1G22920(CSN5A)CSN5A (COP9 SIGNALOSOME 5A)text mining 21798944(yeast-2-hybrid)
AT5G41570(WRKY24)WRKY24; transcription factortext mining 21798944(yeast-2-hybrid)
AT4G26640(WRKY20)WRKY20; transcription factortext mining 21798944(yeast-2-hybrid)

 


Transcriptional Regulation

Transcription factorTarget geneDetail infoRelated Artical
HY5[AT5G11260]AT2G22880 Relationship:Induced Detected Organs:Cotyledon 17337630
HY5 [AT5G11260]AT2G22880 Relationship:Induced Detected Organs:Hypocotyl 17337630
HY5 [AT5G11260]AT2G22880 Relationship:Induced Detected Organs:Root 17337630

 

TFFamilyConfidenceDetails
AGMADSLAT4G18960
AGL3MADSHAT2G03710
ARR10GARPLAT4G31920
ATHB1HD-ZIPLAT3G01470
ATHB5HD-ZIPHAT5G65310
RAV1(2)AP2/EREBPHAT1G13260
TGA1bZIPHAT5G65210