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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:BPC4  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT2G21240BPC4GSP:6 PPI:7BPC4 (BASIC PENTACYSTEINE 4); DNA binding / transcription factor.
Representative Gene Model Description
AT2G21240.1:BASIC PENTACYSTEINE 4 (BPC4); FUNCTIONS IN: transcription factor activity, DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GAGA binding-like (InterPro:IPR010409); BEST Arabidopsis thaliana protein match is: BPC5 (BASIC PENTACYSTEINE 5); DNA binding / transcription factor (TAIR:AT4G38910.1); Has 180 Blast hits to 153 proteins in 24 species: Archae - 0; Bacteria - 2; Metazoa - 54; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

AT2G21240.2:BASIC PENTACYSTEINE 4 (BPC4); FUNCTIONS IN: transcription factor activity, DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GAGA binding-like (InterPro:IPR010409); BEST Arabidopsis thaliana protein match is: BPC5 (BASIC PENTACYSTEINE 5); DNA binding / transcription factor (TAIR:AT4G38910.1); Has 180 Blast hits to 153 proteins in 24 species: Archae - 0; Bacteria - 2; Metazoa - 54; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

Database cross-references
TAIR Gene: AT2G21240;
IPI: IPI00533918;
UniParc: UPI000005EB7E;
REFSEQ_PROVISIONAL: NP_565503.1; NP_850012.1;
KEGG: AT2G21240;

GSPannotationmethodsrelated
AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT5G42520(BPC6)ATBPC6; DNA binding / transcription factortext mining 21347358(PCA)
AT2G21240(BPC4)BPC4 (BASIC PENTACYSTEINE 4); DNA binding / transcription factortext mining 21347358(yeast-2-hybrid)
AT2G01930(BPC1)BPC1 (BASIC PENTACYSTEINE1); DNA binding / specific transcriptional repressor/ transcription factortext mining 21347358(yeast-2-hybrid)
AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21952135(yeast-2-hybrid)
AT5G42520(BPC6)ATBPC6; DNA binding / transcription factortext mining 21347358(yeast-2-hybrid)

 

Predicted
Functional Partners
annotationTotal
AT5G42520No related data.

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
What does the displayed number mean when your mouse moved over a certain icon?(LR)


Transcriptional Regulation

Transcription factorTarget geneDetail infoRelated Artical
BBR_BPC4[AT2G21240]AT1G23420 Relationship:Activation 14731261

 

TFFamilyConfidenceDetails
TGA1bZIPLAT5G65210