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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:AT2G19270  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT2G19270AT2G19270GSP:2 PPI:7hypothetical protein.
Related organ
cell suspension culture      SDS fraction,Schagger 1-DE      Related article
Representative Gene Model Description
AT2G19270.1:FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitotic checkpoint protein PRCC, C-terminal (InterPro:IPR018800); Has 1029 Blast hits to 488 proteins in 117 species: Archae - 0; Bacteria - 14; Metazoa - 432; Fungi - 124; Plants - 39; Viruses - 0; Other Eukaryotes - 420 (source: NCBI BLink).

Database cross-references
TAIR Gene: AT2G19270;
IPI: IPI00525080;
UniParc: UPI00000A1F79;
REFSEQ_PROVISIONAL: NP_179517.1;
KEGG: AT2G19270;

GSPannotationmethodsrelated
AT4G34460(AGB1)AGB1 (GTP BINDING PROTEIN BETA 1); GTPase/ nucleotide binding / protein bindingtext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT4G34460(AGB1)AGB1 (GTP BINDING PROTEIN BETA 1); GTPase/ nucleotide binding / protein bindingtext mining 21952135(yeast-2-hybrid)

 

Predicted
Functional Partners
annotationTotal
AT1G03330small nuclear ribonucleoprotein D, putative / snRNP core SM-like protein, putative / U6 snRNA-associated Sm-like protein, putative
AT1G16260protein kinase family protein
AT1G16590No related data.
AT2G32600hydroxyproline-rich glycoprotein family protein
AT2G33340nucleotide binding / ubiquitin-protein ligase

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
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