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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:EMB2762  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT2G17250EMB2762GSP:2 PPI:25EMB2762 (EMBRYO DEFECTIVE 2762).
Related organ
cell suspension culture      full cell extract,1-DE      Related article
cell suspension culture      SDS fraction,1-DE      Related article
cell suspension culture      detergent fraction,1-DE      Related article
cell suspension culture      soluble fraction,1-DE      Related article
cell suspension culture      urea fraction,1-DE      Related article
Representative Gene Model Description
AT2G17250.1:EMBRYO DEFECTIVE 2762 (EMB2762); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CCAAT-binding factor (InterPro:IPR005612); Has 421 Blast hits to 419 proteins in 141 species: Archae - 0; Bacteria - 0; Metazoa - 152; Fungi - 173; Plants - 32; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink).

Related Mutant  
M4143 Related gene:AT2G17250;
Method:T-DNA Insertion_Mutant,mutation site Intron 7
Phenotype:Embryo Defective,Globular
Related PO:embryo  PO:0009009          
Related Datasource Link:SeedGenes Database

M4144 Related gene:AT2G17250;
Method:T-DNA Insertion_Mutant,mutation site Intron 13
Phenotype:Embryo Defective,Globular
Related PO:embryo  PO:0009009          
Related Datasource Link:SeedGenes Database

M4690 Related gene:AT2G17250;
Method:RNAi
Phenotype:inflorescence axis,PO:0020122;leaf,PO:0009025;
Related PO:inflorescence axis  delayed|inflorescence axis    
Related Datasource Link:agrikola database
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Database cross-references
Entrez Gene: i;
TAIR Gene: AT2G17250;
IPI: i;
UniProtKB/TrEMBL: i;
UniParc: i;
REFSEQ_PROVISIONAL: i;
KEGG: AT2G17250;

GSPannotationmethodsrelated
AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21952135(yeast-2-hybrid)

 

Predicted
Functional Partners
annotationTotal
AT1G72440No related data.
AT3G0963060S ribosomal protein L4/L1 (RPL4A)
AT4G28200hypothetical protein
AT1G31660hypothetical protein
AT3G6077040S ribosomal protein S13 (RPS13A)
AT2G47990No related data.
AT5G66540hypothetical protein
AT1G63810hypothetical protein
AT4G30990binding
AT3G56990No related data.
AT4G25630No related data.
AT1G15440transducin family protein / WD-40 repeat family protein
AT2G34357binding
AT3G16810No related data.
AT3G57000nucleolar essential protein-related
AT4G05410transducin family protein / WD-40 repeat family protein
AT5G16750No related data.
AT4G28450nucleotide binding / protein binding
AT1G69070hypothetical protein
AT3G21540transducin family protein / WD-40 repeat family protein
AT1G10490hypothetical protein
AT1G06720hypothetical protein
AT3G11964RNA binding

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
What does the displayed number mean when your mouse moved over a certain icon?(LR)


Transcriptional Regulation

TFFamilyConfidenceDetails
ARR10GARPLAT4G31920
ATHB1HD-ZIPLAT3G01470
RAV1(2)AP2/EREBPLAT1G13260