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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:KCS9  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT2G16280KCS9GSP:2 PPI:3KCS9 (3-KETOACYL-COA SYNTHASE 9); acyltransferase/ catalytic/ transferase, transferring acyl groups other than amino-acyl groups.
Related organ
cell suspension culture      soluble fraction,Schagger 1-DE      Related article
cell suspension culture      SDS fraction,Schagger 1-DE      Related article
root      SDS fraction,1-DE      Related article
Representative Gene Model Description
AT2G16280.1:3-KETOACYL-COA SYNTHASE 9 (KCS9); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity; INVOLVED IN: very-long-chain fatty acid metabolic process, response to light stimulus, response to cold, response to osmotic stress, cuticle development; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038), Chalcone and stilbene synthases, C-terminal (InterPro:IPR012328); BEST Arabidopsis thaliana protein match is: KCS4 (3-KETOACYL-COA SYNTHASE 4); acyltransferase/ catalytic/ transferase, transferring acyl groups other than amino-acyl groups (TAIR:AT1G19440.1); Has 3160 Blast hits to 3152 proteins in 751 species: Archae - 0; Bacteria - 912; Metazoa - 0; Fungi - 6; Plants - 2124; Viruses - 0; Other Eukaryotes - 118 (source: NCBI BLink).

Predicted Mutant Phenotypes
phloem    PO:0005417;    
Database cross-references
TAIR Gene: AT2G16280;
IPI: IPI00520662;
UniParc: UPI000004851E;
REFSEQ_PROVISIONAL: NP_179223.1;
KEGG: AT2G16280;

GSPannotationmethodsrelated
AT5G56750Ndr family proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT5G56750(NDL1)No related data.text mining 21952135(yeast-2-hybrid)

 

Predicted
Functional Partners
annotationTotal
AT2G26250No related data.

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
What does the displayed number mean when your mouse moved over a certain icon?(LR)


Transcriptional Regulation

TFFamilyConfidenceDetails
ATHB1HD-ZIPLAT3G01470
GATA-1C2C2(Zn) GATALAT3G24050
RAP2.2AP2/EREBPLAT3G14230
RAV1(2)AP2/EREBPLAT1G13260