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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:AT2G03780  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT2G03780AT2G03780GSP:2 PPI:8translin family protein.
Related organ
cell suspension culture      full cell extract,1-DE      Related article
cell suspension culture      soluble fraction,1-DE      Related article
cell suspension culture      soluble fraction,Schagger 1-DE      Related article
cell suspension culture      SDS fraction,Schagger 1-DE      Related article
cotyledon      soluble fraction,1-DE      Related article
flower      soluble fraction,1-DE      Related article
flower bud      soluble fraction,1-DE      Related article
Representative Gene Model Description
AT2G03780.1:translin family protein; FUNCTIONS IN: sequence-specific DNA binding, DNA binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translin, C-terminal (InterPro:IPR016069), Translin (InterPro:IPR002848), Translin, N-terminal (InterPro:IPR016068); Has 433 Blast hits to 433 proteins in 138 species: Archae - 70; Bacteria - 0; Metazoa - 189; Fungi - 103; Plants - 16; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink).

Database cross-references
TAIR Gene: AT2G03780;
IPI: IPI00540328;
UniParc: UPI0000044D64;
REFSEQ_PROVISIONAL: NP_178473.2;
KEGG: AT2G03780;

GSPannotationmethodsrelated
AT5G43850(ARD4)ARD4; acireductone dioxygenase [iron(II)-requiring]/ metal ion bindingtext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT5G43850(ARD4)ARD4; acireductone dioxygenase [iron(II)-requiring]/ metal ion bindingtext mining 21952135(yeast-2-hybrid)

 

Predicted
Functional Partners
annotationTotal
AT2G37020DNA binding / sequence-specific DNA binding
AT1G48410No related data.
AT3G12980No related data.
AT3G16630No related data.
AT5G25080hypothetical protein
AT5G24840tRNA (guanine-N7-)-methyltransferase

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
What does the displayed number mean when your mouse moved over a certain icon?(LR)


Transcriptional Regulation

TFFamilyConfidenceDetails
AGL3MADSLAT2G03710
ATHB1HD-ZIPLAT3G01470
ATHB9HD-ZIPLAT1G30490