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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:AT2G02570  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT2G02570AT2G02570GSP:3 PPI:27nucleic acid binding.
Related organ
cell suspension culture      SDS fraction,1-DE      Related article
cell suspension culture      triton fraction,Schagger 1-DE      Related article
cell suspension culture      soluble fraction,Schagger 1-DE      Related article
cell suspension culture      SDS fraction,Schagger 1-DE      Related article
shoot      Phosphopeptide enriched fraction: soluble fraction of A. thaliana shoots; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
Representative Gene Model Description
AT2G02570.1:nucleic acid binding; FUNCTIONS IN: nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tudor subgroup (InterPro:IPR018351), Tudor (InterPro:IPR002999); Has 231 Blast hits to 231 proteins in 107 species: Archae - 0; Bacteria - 5; Metazoa - 106; Fungi - 55; Plants - 29; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink).

AT2G02570.2:nucleic acid binding; FUNCTIONS IN: nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tudor subgroup (InterPro:IPR018351), Tudor (InterPro:IPR002999); Has 231 Blast hits to 231 proteins in 107 species: Archae - 0; Bacteria - 5; Metazoa - 106; Fungi - 55; Plants - 29; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink).

AT2G02570.3:nucleic acid binding; FUNCTIONS IN: nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tudor subgroup (InterPro:IPR018351), Tudor (InterPro:IPR002999); Has 221 Blast hits to 220 proteins in 104 species: Archae - 0; Bacteria - 0; Metazoa - 102; Fungi - 55; Plants - 29; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink).

AT2G02570.4:nucleic acid binding; FUNCTIONS IN: nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tudor subgroup (InterPro:IPR018351), Tudor (InterPro:IPR002999); Has 231 Blast hits to 231 proteins in 107 species: Archae - 0; Bacteria - 5; Metazoa - 106; Fungi - 55; Plants - 29; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink).

Phosphorylation info: Phosphoprotein with evidence,detail info please click the following link
Database cross-references
TAIR Gene: AT2G02570;
IPI: IPI00657358; IPI00516996;
UniParc: UPI00005DBF17; UPI00000A97EF;
REFSEQ_PROVISIONAL: NP_001077871.1; NP_178361.2; NP_849927.1; NP_001030955.1;
KEGG: AT2G02570;

GSPannotationmethodsrelated
AT4G14716(ATARD1)ATARD1 (ACIREDUCTONE DIOXYGENASE 1); acireductone dioxygenase [iron(II)-requiring]/ metal ion bindingtext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT1G54060(ASIL1)ASIL1 (ARABIDOPSIS 6B-INTERACTING PROTEIN 1-LIKE 1); sequence-specific DNA binding / transcription factortext mining 21798944(yeast-2-hybrid)
AT4G14716(ARD1)No related data.text mining 21952135(yeast-2-hybrid)

 

Predicted
Functional Partners
annotationTotal
AT5G64270splicing factor, putative
AT5G62190No related data.
AT5G61770No related data.
AT5G61140DEAD box RNA helicase, putative
AT5G19820No related data.
AT5G19680leucine-rich repeat family protein
AT5G17900hypothetical protein
AT5G12190RNA recognition motif (RRM)-containing protein
AT5G06160No related data.
AT4G34650No related data.
AT4G20440No related data.
AT4G03430No related data.
AT3G55220splicing factor, putative
AT3G55200splicing factor, putative
AT3G25980mitotic spindle checkpoint protein, putative (MAD2)
AT3G07050GTP-binding family protein
AT2G46200hypothetical protein
AT2G32600hydroxyproline-rich glycoprotein family protein
AT2G18510No related data.
AT1G62730transferase
AT1G61580No related data.
AT1G28060small nuclear ribonucleoprotein family protein / snRNP family protein
AT1G20960No related data.
AT1G13580No related data.

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
What does the displayed number mean when your mouse moved over a certain icon?(LR)


Transcriptional Regulation

TFFamilyConfidenceDetails
ATHB1HD-ZIPLAT3G01470
RAV1(2)AP2/EREBPLAT1G13260
TGA1bZIPLAT5G65210