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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:ATGGH3  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT1G78670ATGGH3GSP:3 PPI:5ATGGH3 (gamma-glutamyl hydrolase 3); catalytic/ hydrolase/ omega peptidase.
Subcellar localization
vacuole: Pubmed15539469;
Related organ
cell suspension culture      full cell extract,1-DE      Related article
cell suspension culture      soluble fraction,1-DE      Related article
cell suspension culture      triton fraction,Schagger 1-DE      Related article
cell suspension culture      soluble fraction,Schagger 1-DE      Related article
cotyledon      SDS fraction,1-DE      Related article
cotyledon      soluble fraction,1-DE      Related article
flower      soluble fraction,1-DE      Related article
flower bud      soluble fraction,1-DE      Related article
root      soluble fraction,1-DE      Related article
silique      soluble fraction,1-DE      Related article
Representative Gene Model Description
AT1G78670.1:gamma-glutamyl hydrolase 3 (ATGGH3); FUNCTIONS IN: hydrolase activity, omega peptidase activity, catalytic activity; INVOLVED IN: glutamine metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C26, gamma-glutamyl hydrolase (InterPro:IPR015527), Peptidase C26 (InterPro:IPR011697); BEST Arabidopsis thaliana protein match is: gamma-glutamyl hydrolase, putative / gamma-Glu-X carboxypeptidase, putative / conjugase, putative (TAIR:AT1G78660.2); Has 274 Blast hits to 271 proteins in 59 species: Archae - 0; Bacteria - 0; Metazoa - 163; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink).

Related KEGG pathway    
Metabolic Pathways
   |----------Metabolism of Cofactors and Vitamins
   |--------------------Folate biosynthesisLink to keggView overall Pathway
Database cross-references
TAIR Gene: AT1G78670;
IPI: IPI00540451;
UniParc: UPI00000AC00A;
REFSEQ_PROVISIONAL: NP_177988.1;
KEGG: AT1G78670;

GSPannotationmethodsrelated
AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21952135(yeast-2-hybrid)
AT1G78680No related data.EC

 

Predicted
Functional Partners
annotationTotal
AT1G78680No related data.
AT1G78660No related data.

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
What does the displayed number mean when your mouse moved over a certain icon?(LR)


Transcriptional Regulation

Transcription factorTarget geneDetail infoRelated Artical
SEPALLATA3[AT1G24260]AT1G78670No detail info. 19385720

 

TFFamilyConfidenceDetails
AGL15MADSLAT5G13790
ARR1GARP/ARR-BLAT3G16857
ARR10GARPLAT4G31920
ARR2GARP/ARR-BLAT4G16110
ATHB1HD-ZIPHAT3G01470
MYB2MYBLAT2G47190
RAV1(2)AP2/EREBPHAT1G13260
TGA1bZIPHAT5G65210