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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:AT1G74470  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT1G74470AT1G74470GSP:4 PPI:4geranylgeranyl reductase.
Subcellar localization
plastid: Pubmed12938931;
Related organ
carpel      detergent fraction,1-DE      Related article
carpel      urea fraction,1-DE      Related article
cell suspension culture      full cell extract,1-DE      Related article
cell suspension culture      SDS fraction,1-DE      Related article
cell suspension culture      detergent fraction,1-DE      Related article
cell suspension culture      soluble fraction,1-DE      Related article
cell suspension culture      urea fraction,1-DE      Related article
cell suspension culture      triton fraction,Schagger 1-DE      Related article
cell suspension culture      soluble fraction,Schagger 1-DE      Related article
cell suspension culture      SDS fraction,Schagger 1-DE      Related article
cotyledon      SDS fraction,1-DE      Related article
flower      SDS fraction,1-DE      Related article
flower bud      SDS fraction,1-DE      Related article
juvenile leaf      SDS fraction,1-DE      Related article
juvenile leaf      soluble fraction,1-DE      Related article
silique      urea fraction,1-DE      Related article
silique      detergent fraction,1-DE      Related article
shoot      Phosphopeptide enriched fraction: SDS fraction of A. thaliana shoots; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
shoot      Flow through fraction: SDS fraction of A. thaliana shoots; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
shoot      Flow through fraction: soluble fraction of A. thaliana shoots; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: SDS fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: SDS fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Flow through fraction: SDS fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchae; IMAC affinity chromatography ng      Related article
rosette      Flow through fraction: SDS fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: Soluble fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: Soluble fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Flow through fraction: Soluble fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
rosette      Flow through fraction: Soluble fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
Representative Gene Model Description
AT1G74470.1:geranylgeranyl reductase; FUNCTIONS IN: geranylgeranyl reductase activity; INVOLVED IN: chlorophyll biosynthetic process; LOCATED IN: chloroplast thylakoid membrane, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Geranylgeranyl reductase (InterPro:IPR010253), Aromatic-ring hydroxylase-like (InterPro:IPR003042), Geranylgeranyl reductase, plants and cyanobacteria (InterPro:IPR011774), Geranylgeranyl reductase, plantal and prokaryotic (InterPro:IPR011777); Has 3175 Blast hits to 3175 proteins in 741 species: Archae - 376; Bacteria - 1560; Metazoa - 6; Fungi - 18; Plants - 221; Viruses - 0; Other Eukaryotes - 994 (source: NCBI BLink).

Related KEGG pathway    
Metabolic Pathways
   |----------Biosynthesis of Secondary Metabolites
   |--------------------Terpenoid biosynthesisLink to keggView overall Pathway
Related Mutant  
    M2435 Related gene:AT1G74470;
    Method:NULL
    Phenotype:albino, no homozygotes
    Related PO:seedling  PO:0008037    leaf  PO:0009025    fruit  PO:0020107          
    Related Datasource Link:Chloroplast Function Database
    *

    Predicted Mutant Phenotypes
    seedling    PO:0008037;    
    Database cross-references
    TAIR Gene: AT1G74470;
    KEGG: AT1G74470;

    GSPannotationmethodsrelated
    AT1G35670(ATCDPK2)ATCDPK2 (CALCIUM-DEPENDENT PROTEIN KINASE 2); calmodulin-dependent protein kinase/ kinasetext mining 19130088(yeast-2-hybrid assay)
    AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21036873(yeast-2-hybrid assay:FDS1176001)
    AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21952135(yeast-2-hybrid)
    AT1G35670(CDPK2)No related data.text mining 19130088(yeast-2-hybrid)

     


    Transcriptional Regulation

    Transcription factorTarget geneDetail infoRelated Artical
    GCN5[AT3G54610]AT1G74470No detail info. 18644002
    HY5[AT5G11260]AT1G74470No detail info. 18644002

     

    TFFamilyConfidenceDetails
    ARR10GARPLAT4G31920
    ATHB1HD-ZIPHAT3G01470
    GATA-1C2C2(Zn) GATALAT3G24050
    ID1C2H2(Zn)LAT1G25250
    RAP2.2AP2/EREBPLAT3G14230
    RAV1(2)AP2/EREBPHAT1G13260