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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:AT1G72900  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT1G72900AT1G72900GSP:4 PPI:5disease resistance protein (TIR-NBS class), putative.
Related organ
cell suspension culture      urea fraction,1-DE      Related article
Representative Gene Model Description
AT1G72900.1:disease resistance protein (TIR-NBS class), putative; FUNCTIONS IN: transmembrane receptor activity; INVOLVED IN: signal transduction, defense response, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS class), putative (TAIR:AT1G72940.1); Has 3199 Blast hits to 3118 proteins in 128 species: Archae - 0; Bacteria - 15; Metazoa - 4; Fungi - 0; Plants - 3179; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).

Related Mutant  
M3132 Related gene:AT3G45540; AT1G72900;
Method:insertion site: 16717902,insertion site: 27437946
Phenotype:semi-sterile (unconfirmed)
Related PO:fruit  PO:0009001          
Related Datasource Link:CSHL database
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Database cross-references
TAIR Gene: AT1G72900;
KEGG: AT1G72900;

GSPannotationmethodsrelated
AT5G56750Ndr family proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT5G56750(NDL1)No related data.text mining 21952135(yeast-2-hybrid)
AT3G24350(SYP32)SYP32 (SYNTAXIN OF PLANTS 32); SNAP receptortext mining 24556609(Affinity Capture-MS)
AT4G02195(SYP42)SYP42 (SYNTAXIN OF PLANTS 42); SNAP receptortext mining 24556609(Affinity Capture-MS)

 

Predicted
Functional Partners
annotationTotal
AT1G72950disease resistance protein (TIR-NBS class), putative

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
What does the displayed number mean when your mouse moved over a certain icon?(LR)


Transcriptional Regulation

TFFamilyConfidenceDetails
AGL1MADSLAT3G58780
AGL15MADSLAT5G13790
AGL2MADSLAT5G15800
AGL3MADSHAT2G03710
ARR10GARPLAT4G31920
RAV1(2)AP2/EREBPHAT1G13260

Related PPIs for TFs
TF1TF2PPI
AT3G58780AT5G13790GO
AT3G58780AT5G15800GO