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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:TFIIIA  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT1G72050TFIIIAGSP:3 PPI:28TFIIIA (TRANSCRIPTION FACTOR IIIA); nucleic acid binding / zinc ion binding.
Subcellar localization
nucleus: Pubmed12711688;
Representative Gene Model Description
AT1G72050.1:TRANSCRIPTION FACTOR IIIA (TFIIIA); FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, C2H2-type/integrase, DNA-binding (InterPro:IPR013087); BEST Arabidopsis thaliana protein match is: REF6 (RELATIVE OF EARLY FLOWERING 6); nucleic acid binding / transcription factor/ zinc ion binding (TAIR:AT3G48430.1); Has 56072 Blast hits to 25360 proteins in 378 species: Archae - 0; Bacteria - 12; Metazoa - 53056; Fungi - 1217; Plants - 183; Viruses - 0; Other Eukaryotes - 1604 (source: NCBI BLink).

AT1G72050.2:TRANSCRIPTION FACTOR IIIA (TFIIIA); FUNCTIONS IN: transcription factor activity, 5S rRNA binding, zinc ion binding, 5S rDNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus, nucleus, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, C2H2-type/integrase, DNA-binding (InterPro:IPR013087); BEST Arabidopsis thaliana protein match is: REF6 (RELATIVE OF EARLY FLOWERING 6); nucleic acid binding / transcription factor/ zinc ion binding (TAIR:AT3G48430.1); Has 96635 Blast hits to 33452 proteins in 763 species: Archae - 0; Bacteria - 12; Metazoa - 91423; Fungi - 2477; Plants - 221; Viruses - 0; Other Eukaryotes - 2502 (source: NCBI BLink).

Database cross-references
TAIR Gene: AT1G72050;
IPI: IPI00548233; IPI00519119;
UniParc: UPI000009CBD0; UPI0000190A0B;
REFSEQ_PROVISIONAL: NP_565033.1; NP_974128.1;
KEGG: AT1G72050;

GSPannotationmethodsrelated
AT4G34460(AGB1)AGB1 (GTP BINDING PROTEIN BETA 1); GTPase/ nucleotide binding / protein bindingtext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT1G06510hypothetical proteintext mining 21798944(yeast-2-hybrid)
AT4G34460(AGB1)AGB1 (GTP BINDING PROTEIN BETA 1); GTPase/ nucleotide binding / protein bindingtext mining 21952135(yeast-2-hybrid)

 

Predicted
Functional Partners
annotationTotal
AT2G41100No related data.
AT3G13920No related data.
AT4G31170protein kinase family protein
AT1G0940012-oxophytodienoate reductase, putative
AT2G03770sulfotransferase family protein
AT1G33320cystathionine gamma-synthase, chloroplast, putative / O-succinylhomoserine (Thiol)-lyase, putative
AT5G27840No related data.
AT1G54270No related data.
AT4G36680pentatricopeptide (PPR) repeat-containing protein
AT1G71330No related data.
AT4G10260pfkB-type carbohydrate kinase family protein
AT2G30980No related data.
AT2G31350No related data.
AT4G24740No related data.
AT5G42130mitochondrial substrate carrier family protein
AT5G47720acetyl-CoA C-acyltransferase, putative / 3-ketoacyl-CoA thiolase, putative
AT1G04420aldo/keto reductase family protein
AT1G26970protein kinase, putative
AT1G205004-coumarate-CoA ligase
AT5G09230No related data.
AT2G28930No related data.
AT3G04940No related data.
AT2G25240serine-type endopeptidase inhibitor
AT3G10640No related data.
AT1G71410protein kinase family protein

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
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