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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:ATWHY2  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT1G71260ATWHY2GSP:2 PPI:2ATWHY2 (A. THALIANA WHIRLY 2); DNA binding.
Subcellar localization
mitochondrion: Pubmed15967440; nucleus: Pubmed15967440;
Related organ
carpel      detergent fraction,1-DE      Related article
carpel      urea fraction,1-DE      Related article
carpel      soluble fraction,1-DE      Related article
cell suspension culture      full cell extract,1-DE      Related article
cell suspension culture      soluble fraction,1-DE      Related article
cell suspension culture      urea fraction,1-DE      Related article
cell suspension culture      soluble fraction,Schagger 1-DE      Related article
cell suspension culture      SDS fraction,Schagger 1-DE      Related article
flower      SDS fraction,1-DE      Related article
flower      soluble fraction,1-DE      Related article
flower bud      SDS fraction,1-DE      Related article
juvenile leaf      soluble fraction,1-DE      Related article
root      soluble fraction,1-DE      Related article
root      SDS fraction,1-DE      Related article
silique      detergent fraction,1-DE      Related article
Representative Gene Model Description
AT1G71260.1:A. THALIANA WHIRLY 2 (ATWHY2); FUNCTIONS IN: DNA binding; INVOLVED IN: defense response; LOCATED IN: mitochondrion, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ssDNA-binding transcriptional regulator (InterPro:IPR009044), Plant transcription factor (InterPro:IPR013742); BEST Arabidopsis thaliana protein match is: WHY1 (WHIRLY 1); DNA binding / telomeric DNA binding (TAIR:AT1G14410.1); Has 57 Blast hits to 57 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).

Database cross-references
TAIR Gene: AT1G71260;
IPI: IPI00517288;
UniParc: UPI00000A6DF0;
REFSEQ_PROVISIONAL: NP_177282.2;
KEGG: AT1G71260;

GSPannotationmethodsrelated
AT4G17730(SYP23)SYP23 (SYNTAXIN OF PLANTS 23); SNAP receptortext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT4G17730(SYP23)SYP23 (SYNTAXIN OF PLANTS 23); SNAP receptortext mining 21952135(yeast-2-hybrid)

 


Transcriptional Regulation

TFFamilyConfidenceDetails
RAV1(2)AP2/EREBPLAT1G13260
TGA1bZIPLAT5G65210