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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:ATEXPA1  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT1G69530ATEXPA1GSP:4 PPI:8ATEXPA1 (ARABIDOPSIS THALIANA EXPANSIN A1).
Subcellar localization
extracellular: Pubmed16381842;
Related organ
carpel      detergent fraction,1-DE      Related article
cell suspension culture      urea fraction,1-DE      Related article
flower      SDS fraction,1-DE      Related article
juvenile leaf      SDS fraction,1-DE      Related article
root      SDS fraction,1-DE      Related article
silique      urea fraction,1-DE      Related article
rosette      Flow through fraction: SDS fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
Representative Gene Model Description
AT1G69530.1:ARABIDOPSIS THALIANA EXPANSIN A1 (ATEXPA1); INVOLVED IN: response to gibberellin stimulus, syncytium formation, response to red light, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Pollen allergen/expansin, C-terminal (InterPro:IPR007117), Barwin-related endoglucanase (InterPro:IPR009009), Expansin (InterPro:IPR002963), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: ATEXPA10 (ARABIDOPSIS THALIANA EXPANSIN A 10); structural constituent of cell wall (TAIR:AT1G26770.2); Has 1459 Blast hits to 1458 proteins in 138 species: Archae - 0; Bacteria - 12; Metazoa - 0; Fungi - 35; Plants - 1384; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink).

AT1G69530.2:ARABIDOPSIS THALIANA EXPANSIN A1 (ATEXPA1); INVOLVED IN: response to gibberellin stimulus, syncytium formation, response to red light, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Pollen allergen/expansin, C-terminal (InterPro:IPR007117), Barwin-related endoglucanase (InterPro:IPR009009), Expansin (InterPro:IPR002963), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: ATEXPA10 (ARABIDOPSIS THALIANA EXPANSIN A 10); structural constituent of cell wall (TAIR:AT1G26770.2); Has 1459 Blast hits to 1458 proteins in 138 species: Archae - 0; Bacteria - 12; Metazoa - 0; Fungi - 35; Plants - 1384; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink).

AT1G69530.3:ARABIDOPSIS THALIANA EXPANSIN A1 (ATEXPA1); INVOLVED IN: response to gibberellin stimulus, syncytium formation, response to red light, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Expansin (InterPro:IPR002963), Rare lipoprotein A (InterPro:IPR005132), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: ATEXPA10 (ARABIDOPSIS THALIANA EXPANSIN A 10); structural constituent of cell wall (TAIR:AT1G26770.2); Has 1459 Blast hits to 1458 proteins in 138 species: Archae - 0; Bacteria - 12; Metazoa - 0; Fungi - 35; Plants - 1384; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink).

AT1G69530.4:ARABIDOPSIS THALIANA EXPANSIN A1 (ATEXPA1); INVOLVED IN: response to gibberellin stimulus, syncytium formation, response to red light, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Expansin (InterPro:IPR002963), Rare lipoprotein A (InterPro:IPR005132), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: ATEXPA10 (ARABIDOPSIS THALIANA EXPANSIN A 10); structural constituent of cell wall (TAIR:AT1G26770.2); Has 1473 Blast hits to 1472 proteins in 139 species: Archae - 0; Bacteria - 12; Metazoa - 0; Fungi - 36; Plants - 1397; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink).

Database cross-references
TAIR Gene: AT1G69530;
IPI: IPI00891527; IPI00522713; IPI00516838;
UniParc: UPI00017390D5; UPI000012A38C; UPI000019715B;
REFSEQ_PROVISIONAL: NP_177112.1; NP_001117573.1; NP_849868.1; NP_849869.1;
KEGG: AT1G69530;

GSPannotationmethodsrelated
AT5G65210(TGA1)TGA1; DNA binding / calmodulin binding / transcription factortext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT1G47230(CYCA3;4)cyclin, putativetext mining 20706207(Affinity Capture-MS)
AT5G65210(TGA1)TGA1; DNA binding / calmodulin binding / transcription factortext mining 21952135(yeast-2-hybrid)
AT2G32710(KRP4)KRP4; cyclin binding / cyclin-dependent protein kinase inhibitortext mining 20706207(Affinity Capture-MS)

 

Predicted
Functional Partners
annotationTotal
AT4G17030No related data.
AT5G48820No related data.
AT1G26770No related data.
AT1G20190No related data.

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
What does the displayed number mean when your mouse moved over a certain icon?(LR)


Transcriptional Regulation

Transcription factorTarget geneDetail infoRelated Artical
HY5 [AT5G11260]AT1G69530 Relationship:Induced Detected Organs:Hypocotyl 17337630

 

TFFamilyConfidenceDetails
AGL1MADSLAT3G58780
AGL15MADSLAT5G13790
AGL2MADSLAT5G15800
AGL3MADSHAT2G03710
ARR1GARP/ARR-BLAT3G16857
ARR10GARPHAT4G31920
ARR2GARP/ARR-BLAT4G16110
RAV1(2)AP2/EREBPHAT1G13260
TGA1bZIPHAT5G65210

Related PPIs for TFs
TF1TF2PPI
AT3G58780AT5G13790GO
AT3G58780AT5G15800GO