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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:AT1G69460  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT1G69460AT1G69460GSP:15 PPI:23emp24/gp25L/p24 family protein.
Subcellar localization
endoplasmic reticulum: Pubmed16618929;
Related organ
cell suspension culture      full cell extract,1-DE      Related article
cell suspension culture      triton fraction,Schagger 1-DE      Related article
flower      SDS fraction,1-DE      Related article
flower bud      SDS fraction,1-DE      Related article
pollen      soluble fraction, 1-DE      Related article
pollen      urea fraction, 1-DE      Related article
pollen      urea total extract, 1-DE      Related article
pollen      total extract, ICAT labelling, avidin affinity flow through      Related article
root      SDS fraction,1-DE      Related article
seed      detergent fraction,1-DE      Related article
seed      urea fraction,1-DE      Related article
silique      urea fraction,1-DE      Related article
silique      detergent fraction,1-DE      Related article
rosette      Phosphopeptide enriched fraction: SDS fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Flow through fraction: SDS fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
Representative Gene Model Description
AT1G69460.1:emp24/gp25L/p24 family protein; FUNCTIONS IN: protein transmembrane transporter activity; INVOLVED IN: intracellular protein transport, transport; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: guard cell, callus; CONTAINS InterPro DOMAIN/s: GOLD (InterPro:IPR009038), emp24/gp25L/p24 (InterPro:IPR000348); BEST Arabidopsis thaliana protein match is: emp24/gp25L/p24 family protein (TAIR:AT1G26690.1); Has 1075 Blast hits to 1073 proteins in 173 species: Archae - 0; Bacteria - 0; Metazoa - 530; Fungi - 308; Plants - 128; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink).

Database cross-references
TAIR Gene: AT1G69460;
IPI: IPI00521856;
UniParc: UPI00000A1034;
REFSEQ_PROVISIONAL: NP_177105.2;
KEGG: AT1G69460;

GSPannotationmethodsrelated
AT4G17730(SYP23)SYP23 (SYNTAXIN OF PLANTS 23); SNAP receptortext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT4G20790leucine-rich repeat family proteintext mining 24833385(PCA)
AT1G14020hypothetical proteintext mining 24833385(PCA)
AT1G63110cell division cycle protein-relatedtext mining 24833385(PCA)
AT4G17730(SYP23)SYP23 (SYNTAXIN OF PLANTS 23); SNAP receptortext mining 21952135(yeast-2-hybrid)
AT4G29330(DER1)DER1 (DERLIN-1)text mining 24833385(PCA)
AT5G21920(YLMG2)No related data.text mining 24833385(PCA)
AT4G14455(ATBET12)ATBET12; SNAP receptor/ protein transportertext mining 24833385(PCA)
AT3G12180cornichon family proteintext mining 24833385(PCA)
AT3G26280(CYP71B4)CYP71B4; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen bindingtext mining 24833385(PCA)
AT4G23400(PIP1;5)PIP1;5 (PLASMA MEMBRANE INTRINSIC PROTEIN 1;5); water channeltext mining 24833385(PCA)
AT1G14990hypothetical proteintext mining 24833385(PCA)
AT3G66654peptidyl-prolyl cis-trans isomerase cyclophilin-type family proteintext mining 24833385(PCA)
AT5G59650leucine-rich repeat protein kinase, putativetext mining 24833385(PCA)
AT3G25805hypothetical proteintext mining 24833385(PCA)

 

Predicted
Functional Partners
annotationTotal
AT3G22845emp24/gp25L/p24 protein-related
AT1G21900emp24/gp25L/p24 family protein
AT1G14010emp24/gp25L/p24 family protein
AT1G57620emp24/gp25L/p24 family protein
AT1G26690emp24/gp25L/p24 family protein
AT1G09580emp24/gp25L/p24 family protein
AT3G10780emp24/gp25L/p24 family protein
AT3G29070protein transmembrane transporter

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
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