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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:AT1G57660  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT1G57660AT1G57660GSP:4 PPI:12060S ribosomal protein L21 (RPL21E).
Related organ
shoot      Flow through fraction: SDS fraction of A. thaliana shoots; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Flow through fraction: SDS fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: Soluble fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Flow through fraction: Soluble fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
rosette      Flow through fraction: Soluble fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
Representative Gene Model Description
AT1G57660.1:60S ribosomal protein L21 (RPL21E); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; EXPRESSED IN: guard cell, juvenile leaf; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Ribosomal protein L21e (InterPro:IPR001147), Ribosomal protein L21e, conserved site (InterPro:IPR018259); BEST Arabidopsis thaliana protein match is: 60S ribosomal protein L21 (TAIR:AT1G57860.1); Has 1146 Blast hits to 1146 proteins in 281 species: Archae - 143; Bacteria - 0; Metazoa - 615; Fungi - 122; Plants - 82; Viruses - 0; Other Eukaryotes - 184 (source: NCBI BLink).

Database cross-references
TAIR Gene: AT1G57660;
IPI: IPI00525678;
REFSEQ_PROVISIONAL: NP_564724.1;
KEGG: AT1G57660;

GSPannotationmethodsrelated
AT4G14716(ATARD1)ATARD1 (ACIREDUCTONE DIOXYGENASE 1); acireductone dioxygenase [iron(II)-requiring]/ metal ion bindingtext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT3G24350(SYP32)SYP32 (SYNTAXIN OF PLANTS 32); SNAP receptortext mining 24556609(Affinity Capture-MS)
AT4G14716(ARD1)No related data.text mining 21952135(yeast-2-hybrid)
AT5G46630clathrin adaptor complexes medium subunit family proteintext mining 23975897(Affinity Capture-MS)

 

Predicted
Functional Partners
annotationTotal
AT1G5786060S ribosomal protein L21
AT1G0110060S acidic ribosomal protein P1 (RPP1A)
AT1G03530No related data.
AT1G0448060S ribosomal protein L23 (RPL23A)
AT1G17370No related data.
AT1G25260acidic ribosomal protein P0-related
AT1G2688060S ribosomal protein L34 (RPL34A)
AT1G3312060S ribosomal protein L9 (RPL90B)
AT1G33140No related data.
AT1G3624060S ribosomal protein L30 (RPL30A)
AT1G43170No related data.
AT1G4883040S ribosomal protein S7 (RPS7A)
AT1G5230060S ribosomal protein L37 (RPL37B)
AT1G56110No related data.
AT1G58380No related data.
AT1G61580No related data.
AT1G6658060S ribosomal protein L10 (RPL10C)
AT1G6743060S ribosomal protein L17 (RPL17B)
AT1G69620No related data.
AT1G70600structural constituent of ribosome
AT1G7405060S ribosomal protein L6 (RPL6C)
AT1G7427060S ribosomal protein L35a (RPL35aC)
AT1G75560zinc knuckle (CCHC-type) family protein
AT1G7794060S ribosomal protein L30 (RPL30B)
AT2G0439040S ribosomal protein S17 (RPS17A)
AT2G0522040S ribosomal protein S17 (RPS17B)
AT2G0999040S ribosomal protein S16 (RPS16A)
AT2G18020No related data.
AT2G1975040S ribosomal protein S30 (RPS30A)
AT2G20060ribosomal protein L4 family protein
AT2G2521060S ribosomal protein L39 (RPL39A)
AT2G27530No related data.
AT2G3161040S ribosomal protein S3 (RPS3A)
AT2G3206040S ribosomal protein S12 (RPS12C)
AT2G3222060S ribosomal protein L27 (RPL27A)
AT2G3337060S ribosomal protein L23 (RPL23B)
AT2G3448060S ribosomal protein L18A (RPL18aB)
AT2G36620No related data.
AT2G37270No related data.
AT2G3760060S ribosomal protein L36 (RPL36A)
AT2G3939060S ribosomal protein L35 (RPL35B)
AT2G42740No related data.
AT2G4346060S ribosomal protein L38 (RPL38A)
AT2G4486060S ribosomal protein L24, putative
AT2G4761060S ribosomal protein L7A (RPL7aA)
AT3G01790ribosomal protein L13 family protein
AT3G0219060S ribosomal protein L39 (RPL39B)
AT3G04400No related data.
AT3G0492040S ribosomal protein S24 (RPS24A)
AT3G0556060S ribosomal protein L22-2 (RPL22B)
AT3G05590No related data.
AT3G0670060S ribosomal protein L29 (RPL29A)
AT3G0920060S acidic ribosomal protein P0 (RPP0B)
AT3G0963060S ribosomal protein L4/L1 (RPL4A)
AT3G1125060S acidic ribosomal protein P0 (RPP0C)
AT3G11940No related data.
AT3G1358060S ribosomal protein L7 (RPL7D)
AT3G1608060S ribosomal protein L37 (RPL37C)
AT3G1678060S ribosomal protein L19 (RPL19B)
AT3G17465No related data.
AT3G20250No related data.
AT3G2339060S ribosomal protein L36a/L44 (RPL36aA)
AT3G2483060S ribosomal protein L13A (RPL13aB)
AT3G4459060S acidic ribosomal protein P2 (RPP2D)
AT3G49010No related data.
AT3G4991060S ribosomal protein L26 (RPL26A)
AT3G5258040S ribosomal protein S14 (RPS14C)
AT3G53020No related data.
AT3G5387040S ribosomal protein S3 (RPS3B)
AT3G55280No related data.
AT3G5749040S ribosomal protein S2 (RPS2D)
AT3G5870060S ribosomal protein L11 (RPL11B)
AT3G5954060S ribosomal protein L38 (RPL38B)
AT3G6024560S ribosomal protein L37a (RPL37aC)
AT4G0223060S ribosomal protein L19 (RPL19C)
AT4G1317060S ribosomal protein L13A (RPL13aC)
AT4G1432060S ribosomal protein L36a/L44 (RPL36aB)
AT4G1500060S ribosomal protein L27 (RPL27C)
AT4G1672060S ribosomal protein L15 (RPL15A)
AT4G1810060S ribosomal protein L32 (RPL32A)
AT4G18730No related data.
AT4G22380ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein
AT4G25880No related data.
AT4G2623060S ribosomal protein L31 (RPL31B)
AT4G26840No related data.
AT4G2709060S ribosomal protein L14 (RPL14B)
AT4G2939040S ribosomal protein S30 (RPS30B)
AT4G30890No related data.
AT4G31700No related data.
AT4G3198560S ribosomal protein L39 (RPL39C)
AT4G3467040S ribosomal protein S3A (RPS3aB)
AT4G35490No related data.
AT5G0261060S ribosomal protein L35 (RPL35D)
AT5G08180ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein
AT5G1838040S ribosomal protein S16 (RPS16C)
AT5G20850No related data.
AT5G2244060S ribosomal protein L10A (RPL10aC)
AT5G23535KOW domain-containing protein
AT5G2390060S ribosomal protein L13 (RPL13D)
AT5G2785060S ribosomal protein L18 (RPL18C)
AT5G39740No related data.
AT5G4577560S ribosomal protein L11 (RPL11D)
AT5G4643060S ribosomal protein L32 (RPL32B)
AT5G4770060S acidic ribosomal protein P1 (RPP1C)
AT5G52640No related data.
AT5G56030No related data.
AT5G5667040S ribosomal protein S30 (RPS30C)
AT5G57450No related data.
AT5G64670ribosomal protein L15 family protein
ATCG00750No related data.
ATCG00830No related data.
ATCG00900No related data.
ATCG01240No related data.
ATCG01310No related data.
AT1G0969060S ribosomal protein L21 (RPL21C)
AT1G0959060S ribosomal protein L21 (RPL21A)

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
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Transcriptional Regulation

TFFamilyConfidenceDetails
AGL3MADSLAT2G03710
ARR1GARP/ARR-BLAT3G16857
RAV1(2)AP2/EREBPLAT1G13260