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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:LOS1  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT1G56070LOS1GSP:7 PPI:341LOS1; copper ion binding / translation elongation factor/ translation factor, nucleic acid binding.
Subcellar localization
chloroplast    Based on Chloroplast Proteomics data;
Related organ
carpel      detergent fraction,1-DE      Related article
carpel      urea fraction,1-DE      Related article
carpel      soluble fraction,1-DE      Related article
cell suspension culture      full cell extract,1-DE      Related article
cell suspension culture      SDS fraction,1-DE      Related article
cell suspension culture      detergent fraction,1-DE      Related article
cell suspension culture      soluble fraction,1-DE      Related article
cell suspension culture      urea fraction,1-DE      Related article
cell suspension culture      soluble fraction,Schagger 1-DE      Related article
cell suspension culture      SDS fraction,Schagger 1-DE      Related article
cotyledon      SDS fraction,1-DE      Related article
cotyledon      soluble fraction,1-DE      Related article
flower      SDS fraction,1-DE      Related article
flower      soluble fraction,1-DE      Related article
flower bud      SDS fraction,1-DE      Related article
flower bud      soluble fraction,1-DE      Related article
juvenile leaf      SDS fraction,1-DE      Related article
juvenile leaf      soluble fraction,1-DE      Related article
pollen      combined fractions, 1-DE      Related article
pollen      soluble fraction, 1-DE      Related article
pollen      urea fraction, 1-DE      Related article
pollen      cyclohexane fraction, 1-DE      Related article
pollen      detergent fraction, 1-DE      Related article
pollen      urea total extract, 1-DE      Related article
pollen      total extract, ICAT labelling, avidin affinity enriched      Related article
pollen      total extract, ICAT labelling, avidin affinity flow through      Related article
root      soluble fraction,1-DE      Related article
root      SDS fraction,1-DE      Related article
seed      detergent fraction,1-DE      Related article
seed      urea fraction,1-DE      Related article
seed      soluble fraction,1-DE      Related article
silique      urea fraction,1-DE      Related article
silique      soluble fraction,1-DE      Related article
silique      detergent fraction,1-DE      Related article
shoot      Phosphopeptide enriched fraction: soluble fraction of A. thaliana shoots; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
shoot      Phosphopeptide enriched fraction: SDS fraction of A. thaliana shoots; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
shoot      Flow through fraction: SDS fraction of A. thaliana shoots; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
shoot      Flow through fraction: soluble fraction of A. thaliana shoots; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: SDS fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: SDS fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Flow through fraction: SDS fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchae; IMAC affinity chromatography ng      Related article
rosette      Flow through fraction: SDS fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: Soluble fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: Soluble fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Flow through fraction: Soluble fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
rosette      Flow through fraction: Soluble fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
Representative Gene Model Description
AT1G56070.1:LOS1; FUNCTIONS IN: translation factor activity, nucleic acid binding, copper ion binding, translation elongation factor activity; INVOLVED IN: response to cold; LOCATED IN: cytosol, nucleolus, chloroplast, plasma membrane, membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation factor EFG/EF2, domain IV (InterPro:IPR005517), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Ribosomal protein S5 domain 2-type fold (InterPro:IPR014721), Elongation factor G, III and V (InterPro:IPR009022), Translation elongation and initiation factors/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: GTP binding / GTPase (TAIR:AT3G12915.1); Has 42666 Blast hits to 38816 proteins in 3090 species: Archae - 921; Bacteria - 22357; Metazoa - 2559; Fungi - 1245; Plants - 829; Viruses - 0; Other Eukaryotes - 14755 (source: NCBI BLink).

Phosphorylation info: Phosphoprotein with evidence,detail info please click the following link
Related Mutant  
    M2719 Related gene:AT1G56050; AT1G56060; AT1G56070;
    Method:T-DNA insertion
    Phenotype:General,files
    Related Datasource Link:Riken database
    *

    Database cross-references
    TAIR Gene: AT1G56070;
    IPI: IPI00517335;
    UniParc: UPI00000A4358;
    REFSEQ_PROVISIONAL: NP_849818.1;
    KEGG: AT1G56070;

    GSPannotationmethodsrelated
    AT2G26300(GP_ALPHA_1)GP ALPHA 1 (G PROTEIN ALPHA SUBUNIT 1); GTP binding / GTPase/ channel regulator/ signal transducertext mining 21036873(yeast-2-hybrid assay:FDS1176001)
    AT2G26300(GP ALPHA 1)No related data.text mining 21952135(yeast-2-hybrid)
    AT1G22300(GRF10)GRF10 (GENERAL REGULATORY FACTOR 10); ATP binding / protein binding / protein phosphorylated amino acid bindingtext mining 21766784(Affinity Capture-MS)
    AT4G30840WD-40 repeat protein familytext mining 21189294(Affinity Capture-MS)
    AT5G46630clathrin adaptor complexes medium subunit family proteintext mining 23975897(Affinity Capture-MS)
    AT5G04200(MC9)No related data.text mining 23964026(Biochemical Activity)
    -(RAD23A)No related data.text mining 19292762(Reconstituted Complex)

     

    Predicted
    Functional Partners
    annotationTotal
    AT5G25230elongation factor Tu family protein
    AT1G21720No related data.
    AT1G06220No related data.
    AT1G0110060S acidic ribosomal protein P1 (RPP1A)
    AT1G02170No related data.
    AT1G03475No related data.
    AT1G03530No related data.
    AT1G03790No related data.
    AT1G03860No related data.
    AT1G04270No related data.
    AT1G0448060S ribosomal protein L23 (RPL23A)
    AT1G04980No related data.
    AT1G05000tyrosine specific protein phosphatase family protein
    AT1G07770No related data.
    AT1G08880No related data.
    AT1G10430No related data.
    AT1G10580transducin family protein / WD-40 repeat family protein
    AT1G13950No related data.
    AT1G14610No related data.
    AT1G14650SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein
    AT1G15710prephenate dehydrogenase family protein
    AT1G16220protein phosphatase 2C family protein / PP2C family protein
    AT1G16280DEAD/DEAH box helicase, putative
    AT1G16740ribosomal protein L20 family protein
    AT1G17130cell cycle control protein-related
    AT1G17720No related data.
    AT1G18080No related data.
    AT1G20960No related data.
    AT1G21750No related data.
    AT1G22170phosphoglycerate/bisphosphoglycerate mutase family protein
    AT1G22780No related data.
    AT1G23260No related data.
    AT1G23290No related data.
    AT1G24510T-complex protein 1 epsilon subunit, putative / TCP-1-epsilon, putative / chaperonin, putative
    AT1G25260acidic ribosomal protein P0-related
    AT1G26480No related data.
    AT1G2740060S ribosomal protein L17 (RPL17A)
    AT1G28060small nuclear ribonucleoprotein family protein / snRNP family protein
    AT1G29330No related data.
    AT1G30580GTP binding
    AT1G33040No related data.
    AT1G3312060S ribosomal protein L9 (RPL90B)
    AT1G33140No related data.
    AT1G3403040S ribosomal protein S18 (RPS18B)
    AT1G43170No related data.
    AT1G43860transcription factor
    AT1G49760No related data.
    AT1G50030No related data.
    AT1G52980GTP-binding family protein
    AT1G53240malate dehydrogenase (NAD), mitochondrial
    AT1G54140No related data.
    AT1G54270No related data.
    AT1G56110No related data.
    AT1G57720elongation factor 1B-gamma, putative / eEF-1B gamma, putative
    AT1G58380No related data.
    AT1G59830No related data.
    AT1G60170No related data.
    AT1G61580No related data.
    AT1G62740stress-inducible protein, putative
    AT1G64550No related data.
    AT1G65040protein binding / zinc ion binding
    AT1G65650No related data.
    AT1G6658060S ribosomal protein L10 (RPL10C)
    AT1G66810zinc finger (CCCH-type) family protein
    AT1G6743060S ribosomal protein L17 (RPL17B)
    AT1G70600structural constituent of ribosome
    AT1G72370No related data.
    AT1G73180eukaryotic translation initiation factor-related
    AT1G74030enolase, putative
    AT1G75560zinc knuckle (CCHC-type) family protein
    AT1G76760No related data.
    AT1G76850No related data.
    AT1G77510No related data.
    AT1G7794060S ribosomal protein L30 (RPL30B)
    AT1G79000No related data.
    AT1G79090hypothetical protein
    AT1G79750No related data.
    AT1G79930No related data.
    AT1G80070No related data.
    AT1G80710transducin family protein / WD-40 repeat family protein
    AT1G80930MIF4G domain-containing protein / MA3 domain-containing protein
    AT2G01270No related data.
    AT2G03870small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative
    AT2G0999040S ribosomal protein S16 (RPS16A)
    AT2G13540No related data.
    AT2G16860GCIP-interacting family protein
    AT2G17190ubiquitin family protein
    AT2G18020No related data.
    AT2G18510No related data.
    AT2G20060ribosomal protein L4 family protein
    AT2G21790No related data.
    AT2G22240No related data.
    AT2G25070protein phosphatase 2C, putative / PP2C, putative
    AT2G26460RED family protein
    AT2G27170No related data.
    AT2G27530No related data.
    AT2G2771060S acidic ribosomal protein P2 (RPP2B)
    AT2G30970No related data.
    AT2G3161040S ribosomal protein S3 (RPS3A)
    AT2G31970No related data.
    AT2G32600hydroxyproline-rich glycoprotein family protein
    AT2G33340nucleotide binding / ubiquitin-protein ligase
    AT2G3337060S ribosomal protein L23 (RPL23B)
    AT2G33410heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative
    AT2G33840tRNA synthetase class I (W and Y) family protein
    AT2G34260transducin family protein / WD-40 repeat family protein
    AT2G35040AICARFT/IMPCHase bienzyme family protein
    AT2G36530No related data.
    AT2G36880No related data.
    AT2G37270No related data.
    AT2G37770aldo/keto reductase family protein
    AT2G37790aldo/keto reductase family protein
    AT2G38560No related data.
    AT2G3939060S ribosomal protein L35 (RPL35B)
    AT2G39770No related data.
    AT2G40660tRNA-binding region domain-containing protein
    AT2G41530No related data.
    AT2G42740No related data.
    AT2G42810No related data.
    AT2G43770transducin family protein / WD-40 repeat family protein
    AT2G4412060S ribosomal protein L7 (RPL7C)
    AT2G44510p21Cip1-binding protein-related
    AT2G44950No related data.
    AT3G01790ribosomal protein L13 family protein
    AT3G01800ribosome recycling factor family protein / ribosome releasing factor family protein
    AT3G02090No related data.
    AT3G02320RNA binding / tRNA (guanine-N2-)-methyltransferase
    AT3G02530chaperonin, putative
    AT3G02540No related data.
    AT3G04400No related data.
    AT3G04770No related data.
    AT3G04780hypothetical protein
    AT3G0492040S ribosomal protein S24 (RPS24A)
    AT3G05060SAR DNA-binding protein, putative
    AT3G05590No related data.
    AT3G05760nucleic acid binding / zinc ion binding
    AT3G06720No related data.
    AT3G08560No related data.
    AT3G08710No related data.
    AT3G0920060S acidic ribosomal protein P0 (RPP0B)
    AT3G0963060S ribosomal protein L4/L1 (RPL4A)
    AT3G10050No related data.
    AT3G10070No related data.
    AT3G1125060S acidic ribosomal protein P0 (RPP0C)
    AT3G1151040S ribosomal protein S14 (RPS14B)
    AT3G11710No related data.
    AT3G11940No related data.
    AT3G12110No related data.
    AT3G12530No related data.
    AT3G12580No related data.
    AT3G12670No related data.
    AT3G12860nucleolar protein Nop56, putative
    AT3G12980No related data.
    AT3G1358060S ribosomal protein L7 (RPL7D)
    AT3G13920No related data.
    AT3G14080small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative
    AT3G16090zinc finger (C3HC4-type RING finger) family protein
    AT3G1678060S ribosomal protein L19 (RPL19B)
    AT3G17465No related data.
    AT3G17820No related data.
    AT3G18130No related data.
    AT3G18140transducin family protein / WD-40 repeat family protein
    AT3G18165No related data.
    AT3G18790hypothetical protein
    AT3G19210No related data.
    AT3G19760eukaryotic translation initiation factor 4A, putative / eIF-4A, putative / DEAD box RNA helicase, putative
    AT3G19840FF domain-containing protein / WW domain-containing protein
    AT3G20790oxidoreductase family protein
    AT3G22845emp24/gp25L/p24 protein-related
    AT3G23620brix domain-containing protein
    AT3G23940dehydratase family
    AT3G2483060S ribosomal protein L13A (RPL13aB)
    AT3G25800No related data.
    AT3G26560ATP-dependent RNA helicase, putative
    AT3G27730No related data.
    AT3G4398040S ribosomal protein S29 (RPS29A)
    AT3G4401040S ribosomal protein S29 (RPS29B)
    AT3G4459060S acidic ribosomal protein P2 (RPP2D)
    AT3G4503040S ribosomal protein S20 (RPS20A)
    AT3G45640No related data.
    AT3G46040No related data.
    AT3G47120RNA recognition motif (RRM)-containing protein
    AT3G48560No related data.
    AT3G4991060S ribosomal protein L26 (RPL26A)
    AT3G50670No related data.
    AT3G52560No related data.
    AT3G5258040S ribosomal protein S14 (RPS14C)
    AT3G5387040S ribosomal protein S3 (RPS3B)
    AT3G54210ribosomal protein L17 family protein
    AT3G54540No related data.
    AT3G54610No related data.
    AT3G55200splicing factor, putative
    AT3G55220splicing factor, putative
    AT3G55280No related data.
    AT3G55620No related data.
    AT3G5749040S ribosomal protein S2 (RPS2D)
    AT3G5870060S ribosomal protein L11 (RPL11B)
    AT3G59410protein kinase family protein
    AT3G59630diphthamide synthesis DPH2 family protein
    AT3G59970No related data.
    AT3G59980tRNA-binding region domain-containing protein
    AT3G6077040S ribosomal protein S13 (RPS13A)
    AT4G00100No related data.
    AT4G01310ribosomal protein L5 family protein
    AT4G01370No related data.
    AT4G0223060S ribosomal protein L19 (RPL19C)
    AT4G02450glycine-rich protein
    AT4G03430No related data.
    AT4G04950thioredoxin family protein
    AT4G05420No related data.
    AT4G08350No related data.
    AT4G09320No related data.
    AT4G09800No related data.
    AT4G11010No related data.
    AT4G11120translation elongation factor Ts (EF-Ts), putative
    AT4G11640No related data.
    AT4G11820No related data.
    AT4G1317060S ribosomal protein L13A (RPL13aC)
    AT4G14880No related data.
    AT4G15940fumarylacetoacetate hydrolase family protein
    AT4G16420No related data.
    AT4G18730No related data.
    AT4G20360No related data.
    AT4G21110G10 family protein
    AT4G21710No related data.
    AT4G21800No related data.
    AT4G22285ubiquitin thiolesterase/ zinc ion binding
    AT4G22380ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein
    AT4G23900nucleoside diphosphate kinase 4 (NDK4)
    AT4G24190No related data.
    AT4G26780No related data.
    AT4G26840No related data.
    AT4G27650No related data.
    AT4G3080040S ribosomal protein S11 (RPS11B)
    AT4G30870No related data.
    AT4G30890No related data.
    AT4G32520No related data.
    AT4G32700DNA-directed DNA polymerase family protein
    AT4G3386540S ribosomal protein S29 (RPS29C)
    AT4G34110No related data.
    AT4G3455540S ribosomal protein S25, putative
    AT4G34620No related data.
    AT4G35490No related data.
    AT4G37930No related data.
    AT4G38440hypothetical protein
    AT4G38630No related data.
    AT4G39520GTP-binding protein, putative
    AT4G39800No related data.
    AT5G0261060S ribosomal protein L35 (RPL35D)
    AT5G0296040S ribosomal protein S23 (RPS23B)
    AT5G05010clathrin adaptor complexes medium subunit-related
    AT5G05730No related data.
    AT5G06000No related data.
    AT5G06160No related data.
    AT5G0709040S ribosomal protein S4 (RPS4B)
    AT5G08180ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein
    AT5G08290No related data.
    AT5G08550No related data.
    AT5G0950040S ribosomal protein S15 (RPS15C)
    AT5G09650No related data.
    AT5G10170No related data.
    AT5G10220No related data.
    AT5G10790No related data.
    AT5G12030No related data.
    AT5G12190RNA recognition motif (RRM)-containing protein
    AT5G12480No related data.
    AT5G13850No related data.
    AT5G14580polyribonucleotide nucleotidyltransferase, putative
    AT5G14800No related data.
    AT5G1520040S ribosomal protein S9 (RPS9B)
    AT5G15750RNA-binding S4 domain-containing protein
    AT5G16780No related data.
    AT5G17900hypothetical protein
    AT5G1838040S ribosomal protein S16 (RPS16C)
    AT5G22060No related data.
    AT5G2244060S ribosomal protein L10A (RPL10aC)
    AT5G22840protein kinase family protein
    AT5G23290No related data.
    AT5G23535KOW domain-containing protein
    AT5G23670No related data.
    AT5G25150No related data.
    AT5G26360chaperonin, putative
    AT5G27640No related data.
    AT5G2785060S ribosomal protein L18 (RPL18C)
    AT5G28740transcription-coupled DNA repair protein-related
    AT5G3553040S ribosomal protein S3 (RPS3C)
    AT5G36880acetyl-CoA synthetase, putative / acetate-CoA ligase, putative
    AT5G39740No related data.
    AT5G41150No related data.
    AT5G42190No related data.
    AT5G44200No related data.
    AT5G4577560S ribosomal protein L11 (RPL11D)
    AT5G46160ribosomal protein L14 family protein / huellenlos paralog (HLP)
    AT5G46180No related data.
    AT5G47010No related data.
    AT5G4770060S acidic ribosomal protein P1 (RPP1C)
    AT5G48120binding
    AT5G48220indole-3-glycerol phosphate synthase, putative
    AT5G4876060S ribosomal protein L13A (RPL13aD)
    AT5G51300splicing factor-related
    AT5G52640No related data.
    AT5G53460No related data.
    AT5G54910DEAD/DEAH box helicase, putative
    AT5G55160No related data.
    AT5G55260No related data.
    AT5G56030No related data.
    AT5G56900CwfJ-like family protein / zinc finger (CCCH-type) family protein
    AT5G56940ribosomal protein S16 family protein
    AT5G5842040S ribosomal protein S4 (RPS4D)
    AT5G5985040S ribosomal protein S15A (RPS15aF)
    AT5G60640No related data.
    AT5G60790No related data.
    AT5G61140DEAD box RNA helicase, putative
    AT5G6230040S ribosomal protein S20 (RPS20C)
    AT5G63010WD-40 repeat family protein
    AT5G64270splicing factor, putative
    AT5G64650ribosomal protein L17 family protein
    AT5G64670ribosomal protein L15 family protein
    AT5G65490hypothetical protein
    AT5G67630DNA helicase, putative
    ATCG00065No related data.
    ATCG00160No related data.
    ATCG00330No related data.
    ATCG00750No related data.
    ATCG00790No related data.
    ATCG00830No related data.
    ATCG00900No related data.
    ATCG00905No related data.
    ATCG01230No related data.
    ATCG01240No related data.
    ATCG01310No related data.
    ATMG00980No related data.
    AT1G18070EF-1-alpha-related GTP-binding protein, putative
    AT1G04170No related data.

    O: Ortholog interaction datasets
    G: Shared biological function:Go Ontology
    E: Co-expression
    F: Gene fusion method
    N: Gene neighbors method
    P: Phylogenetic profile method
    D: Enriched domain pair
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