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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:AT1G54310  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT1G54310AT1G54310GSP:2 PPI:2RNA binding.
Subcellar localization
plasma membrane: Pubmed17317660;
Related organ
seed      urea fraction,1-DE      Related article
Representative Gene Model Description
AT1G54310.1:RNA binding; FUNCTIONS IN: RNA binding; LOCATED IN: plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: PUA (InterPro:IPR002478); Has 1177 Blast hits to 1177 proteins in 548 species: Archae - 25; Bacteria - 1022; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink).

AT1G54310.2:RNA binding; FUNCTIONS IN: RNA binding; LOCATED IN: plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: PUA (InterPro:IPR002478); Has 3651 Blast hits to 3638 proteins in 946 species: Archae - 69; Bacteria - 3053; Metazoa - 33; Fungi - 6; Plants - 28; Viruses - 0; Other Eukaryotes - 462 (source: NCBI BLink).

Database cross-references
TAIR Gene: AT1G54310;
IPI: IPI00540955; IPI00538326;
UniParc: UPI000034F49D; UPI00000A4BEE;
REFSEQ_PROVISIONAL: NP_564655.1; NP_974023.1;
KEGG: AT1G54310;

GSPannotationmethodsrelated
AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21952135(yeast-2-hybrid)

 


Transcriptional Regulation

TFFamilyConfidenceDetails
RAV1(2)AP2/EREBPLAT1G13260