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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:TCP3  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT1G53230TCP3GSP:39 PPI:40TCP3; transcription factor.
Subcellar localization
nucleus: Pubmed12444417;
Representative Gene Model Description
AT1G53230.1:TCP3; FUNCTIONS IN: transcription factor activity; INVOLVED IN: cell differentiation, positive regulation of development, heterochronic, leaf development, leaf morphogenesis, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP4 (TCP family transcription factor 4); transcription factor (TAIR:AT3G15030.2); Has 1290 Blast hits to 1290 proteins in 312 species: Archae - 0; Bacteria - 8; Metazoa - 44; Fungi - 11; Plants - 1224; Viruses - 1; Other Eukaryotes - 2 (source: NCBI BLink).

Related Mutant  
M5087 Related gene:AT1G53230;
Method:RNA interference
Phenotype:transgenic plants that expressed the double-stranded RNA for RNA interference (RNAi) of the TCP3 gene had basically normal cotyledons (see Supplemental Figure 6 online).(PMID: 17307931)
Related PO:no different phenotype      
Related Datasource Link:
*

Database cross-references
Entrez Gene: n;
TAIR Gene: AT1G53230;
IPI: n;
UniProtKB/TrEMBL: n;
UniParc: n;
REFSEQ_PROVISIONAL: n;
KEGG: AT1G53230;

GSPannotationmethodsrelated
AT2G26300(GP_ALPHA_1)GP ALPHA 1 (G PROTEIN ALPHA SUBUNIT 1); GTP binding / GTPase/ channel regulator/ signal transducertext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT5G08070(TCP17)TCP17 (TCP DOMAIN PROTEIN 17); transcription factortext mining 24129704(yeast-2-hybrid)
AT5G49330(MYB111)MYB111 (MYB DOMAIN PROTEIN 111); DNA binding / transcription factortext mining 24118612(yeast-2-hybrid)
AT3G27010(TCP20)No related data.text mining 24129704(yeast-2-hybrid)
AT1G32100(PRR1)PRR1 (PINORESINOL REDUCTASE 1); pinoresinol reductasetext mining 21183706(yeast-2-hybrid)
AT4G18390(TCP2)No related data.text mining 24129704(yeast-2-hybrid)
AT2G47460(MYB12)MYB12 (MYB DOMAIN PROTEIN 12); DNA binding / transcription activator/ transcription factortext mining 24118612(yeast-2-hybrid)
AT1G35560TCP family transcription factor, putativetext mining 24129704(yeast-2-hybrid)
AT3G15030(TCP4)TCP4 (TCP family transcription factor 4); transcription factortext mining 24129704(yeast-2-hybrid)
AT5G60970(TCP5)TCP5 (TEOSINTE BRANCHED1, CYCLOIDEA AND PCF TRANSCRIPTION FACTOR 5); transcription factortext mining 24129704(yeast-2-hybrid)
AT2G28290(SYD)SYD (SPLAYED); ATPase/ chromatin bindingtext mining 23449474(yeast-2-hybrid)
AT2G31070(TCP10)TCP10 (TCP DOMAIN PROTEIN 10); transcription factortext mining 24129704(yeast-2-hybrid)
AT2G47620(SWI3A)No related data.text mining 23449474(yeast-2-hybrid)
AT1G53230(TCP3)TCP3; transcription factortext mining 24689742(Affinity Capture-Western)
AT1G66390(MYB90)MYB90 (MYB DOMAIN PROTEIN 90); DNA binding / transcription factortext mining 24118612(PCA)
AT4G27330(SPL)SPL (SPOROCYTELESS); protein binding / transcription factortext mining 25527103(yeast-2-hybrid)
AT5G27030(TPR3)TPR3 (TOPLESS-RELATED 3)text mining 22065421(yeast-2-hybrid)
AT5G51910TCP family transcription factor, putativetext mining 24129704(yeast-2-hybrid)
AT1G65620(AS2)AS2 (ASYMMETRIC LEAVES 2); protein bindingtext mining 22380849(Reconstituted Complex)
AT1G65620(AS2)AS2 (ASYMMETRIC LEAVES 2); protein bindingtext mining 22380849(Affinity Capture-Western)
AT1G30210(TCP24)TCP24 (TEOSINTE BRANCHED1, CYCLOIDEA, AND PCF FAMILY 24); transcription factortext mining 24129704(yeast-2-hybrid)
AT1G15750(TPL)TPL (TOPLESS); protein binding / protein homodimerization/ transcription repressortext mining 22065421(yeast-2-hybrid)
AT1G58100TCP family transcription factor, putativetext mining 24129704(yeast-2-hybrid)
AT1G71030(MYBL2)MYBL2 (ARABIDOPSIS MYB-LIKE 2); DNA binding / transcription factortext mining 24118612(yeast-2-hybrid)
AT4G18170(WRKY28)WRKY28; transcription factortext mining 25702611(PCA)
AT1G66380(MYB114)MYB114 (myb domain protein 114); DNA binding / transcription factortext mining 24118612(PCA)
AT2G26300(GP ALPHA 1)No related data.text mining 21952135(yeast-2-hybrid)
AT1G69690TCP family transcription factor, putativetext mining 24129704(yeast-2-hybrid)
AT3G47620(TCP14)No related data.text mining 24129704(yeast-2-hybrid)
AT2G37000TCP family transcription factor, putativetext mining 24129704(yeast-2-hybrid)
AT5G08330TCP family transcription factor, putativetext mining 24129704(yeast-2-hybrid)
AT2G46020(BRM)transcription regulatory protein SNF2, putativetext mining 23449474(yeast-2-hybrid)
AT1G56650(PAP1)PAP1 (PHYTOCHROME-ASSOCIATED PROTEIN 1); transcription factortext mining 24118612(PCA)
AT5G35550(TT2)TT2 (TRANSPARENT TESTA 2); DNA binding / transcription factortext mining 24118612(PCA)
AT2G33610(SWI3B)No related data.text mining 23449474(yeast-2-hybrid)
AT1G66370(MYB113)MYB113 (myb domain protein 113); DNA binding / transcription factortext mining 24118612(PCA)
AT1G21700(SWI3C)No related data.text mining 23449474(yeast-2-hybrid)
AT1G14920(GAI)GAI (GIBBERELLIC ACID INSENSITIVE); transcription factortext mining 25118255(yeast-2-hybrid)
AT3G02150(PTF1)PTF1 (PLASTID TRANSCRIPTION FACTOR 1); transcription factortext mining 24129704(yeast-2-hybrid)

 

Predicted
Functional Partners
annotationTotal
AT3G15030No related data.

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
What does the displayed number mean when your mouse moved over a certain icon?(LR)


Transcriptional Regulation

Transcription factorTarget geneDetail infoRelated Artical
SEPALLATA3[AT1G24260]AT1G53230No detail info. 19385720

 

TFFamilyConfidenceDetails
AGMADSLAT4G18960
ATHB1HD-ZIPLAT3G01470
RAV1(2)AP2/EREBPHAT1G13260
TGA1bZIPHAT5G65210