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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:TUA2  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT1G50010TUA2GSP:5 PPI:14TUA2; structural constituent of cytoskeleton.
Subcellar localization
cytoskeleton: Pubmed16461285;
Related organ
pollen      soluble fraction, 1-DE      Related article
pollen      urea total extract, 1-DE      Related article
shoot      Flow through fraction: soluble fraction of A. thaliana shoots; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Flow through fraction: SDS fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
rosette      Flow through fraction: Soluble fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
rosette      Flow through fraction: Soluble fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
Representative Gene Model Description
AT1G50010.1:TUA2; FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: microtubule-based process, response to salt stress; LOCATED IN: cytosol, tubulin complex, cell wall, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alpha tubulin (InterPro:IPR002452), Tubulin, conserved site (InterPro:IPR017975), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase (InterPro:IPR003008), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: TUA4; structural constituent of cytoskeleton (TAIR:AT1G04820.1); Has 16390 Blast hits to 16316 proteins in 3499 species: Archae - 0; Bacteria - 25; Metazoa - 3558; Fungi - 9031; Plants - 1008; Viruses - 0; Other Eukaryotes - 2768 (source: NCBI BLink).

Related Mutant  
M5115 Related gene:AT1G50010; AT5G19770; AT1G04820; AT5G19780; AT4G14960;
Method:tua6cys213 is a temperature sensitive allele;antisense data,available.
Phenotype:helical organ twisting and helical microtubule arrays in dominant-negative mutants , altered microtubule dynamics in helical growth background , stunted growth in a-tubulin antisense plants
Related PO:NULL      
Related Datasource Link:
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Database cross-references
Entrez Gene: N;
TAIR Gene: AT1G50010;
IPI: N;
UniProtKB/TrEMBL: N;
UniParc: N;
REFSEQ_PROVISIONAL: N;
KEGG: AT1G50010;

GSPannotationmethodsrelated
AT5G43850(ARD4)ARD4; acireductone dioxygenase [iron(II)-requiring]/ metal ion bindingtext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT5G56750Ndr family proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT5G56750(NDL1)No related data.text mining 21952135(yeast-2-hybrid)
AT5G43850(ARD4)ARD4; acireductone dioxygenase [iron(II)-requiring]/ metal ion bindingtext mining 21952135(yeast-2-hybrid)
AT5G03240(UBQ3)UBQ3 (POLYUBIQUITIN 3); protein bindingtext mining 19429840(Affinity Capture-MS)

 

Predicted
Functional Partners
annotationTotal
AT4G28560No related data.
AT4G14960No related data.
AT5G19780No related data.
AT5G19770No related data.
AT5G62700No related data.
AT5G62690No related data.
AT1G64740No related data.
AT5G12250No related data.
AT1G04820No related data.

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
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Transcriptional Regulation

TFFamilyConfidenceDetails
AGL3MADSHAT2G03710
ARR1GARP/ARR-BLAT3G16857
RAV1(2)AP2/EREBPLAT1G13260