Home Contact Sitemap

AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:AT1G27530  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT1G27530AT1G27530GSP:4 PPI:4hypothetical protein.
Related organ
carpel      urea fraction,1-DE      Related article
carpel      soluble fraction,1-DE      Related article
cell suspension culture      soluble fraction,1-DE      Related article
cell suspension culture      soluble fraction,Schagger 1-DE      Related article
flower      soluble fraction,1-DE      Related article
juvenile leaf      soluble fraction,1-DE      Related article
pollen      soluble fraction, 1-DE      Related article
pollen      urea total extract, 1-DE      Related article
root      soluble fraction,1-DE      Related article
root      SDS fraction,1-DE      Related article
seed      detergent fraction,1-DE      Related article
silique      urea fraction,1-DE      Related article
silique      detergent fraction,1-DE      Related article
Representative Gene Model Description
AT1G27530.1:FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-fold modifier-conjugating enzyme 1 (InterPro:IPR014806); Has 183 Blast hits to 183 proteins in 80 species: Archae - 0; Bacteria - 0; Metazoa - 126; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink).

Predicted Mutant Phenotypes
plant organ development stage    PO:0025339;    
Database cross-references
TAIR Gene: AT1G27530;
IPI: IPI00531053;
UniParc: UPI00000A993B;
REFSEQ_PROVISIONAL: NP_564289.1;
KEGG: AT1G27530;

GSPannotationmethodsrelated
AT4G34460(AGB1)AGB1 (GTP BINDING PROTEIN BETA 1); GTPase/ nucleotide binding / protein bindingtext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT3G59220(PRN)PRN (PIRIN); calmodulin bindingtext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT4G34460(AGB1)AGB1 (GTP BINDING PROTEIN BETA 1); GTPase/ nucleotide binding / protein bindingtext mining 21952135(yeast-2-hybrid)
AT3G59220(PRN)PRN (PIRIN); calmodulin bindingtext mining 21952135(yeast-2-hybrid)

 


Transcriptional Regulation

TFFamilyConfidenceDetails
ATHB1HD-ZIPLAT3G01470