Home Contact Sitemap

AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:AT1G26550  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT1G26550AT1G26550GSP:2 PPI:29peptidyl-prolyl cis-trans isomerase PPIC-type family protein.
Related organ
cell suspension culture      full cell extract,1-DE      Related article
cell suspension culture      soluble fraction,1-DE      Related article
cotyledon      SDS fraction,1-DE      Related article
juvenile leaf      SDS fraction,1-DE      Related article
juvenile leaf      soluble fraction,1-DE      Related article
pollen      combined fractions, 1-DE      Related article
pollen      soluble fraction, 1-DE      Related article
pollen      urea fraction, 1-DE      Related article
pollen      urea total extract, 1-DE      Related article
pollen      total extract, ICAT labelling, avidin affinity flow through      Related article
root      SDS fraction,1-DE      Related article
seed      detergent fraction,1-DE      Related article
seed      urea fraction,1-DE      Related article
shoot      Flow through fraction: SDS fraction of A. thaliana shoots; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Phosphopeptide enriched fraction: Soluble fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Flow through fraction: Soluble fraction of A. thaliana rosette leaves ED; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
rosette      Flow through fraction: Soluble fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
Representative Gene Model Description
AT1G26550.1:peptidyl-prolyl cis-trans isomerase PPIC-type family protein; FUNCTIONS IN: isomerase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, PpiC-type (InterPro:IPR000297); BEST Arabidopsis thaliana protein match is: PIN1AT (PEPTIDYLPROLYL CIS/TRANS ISOMERASE, NIMA-INTERACTING 1); peptidyl-prolyl cis-trans isomerase (TAIR:AT2G18040.1); Has 4470 Blast hits to 4300 proteins in 976 species: Archae - 12; Bacteria - 3095; Metazoa - 206; Fungi - 127; Plants - 110; Viruses - 0; Other Eukaryotes - 920 (source: NCBI BLink).

Database cross-references
TAIR Gene: AT1G26550;
IPI: IPI00541043;
UniParc: UPI00000A9F31;
REFSEQ_PROVISIONAL: NP_564250.1;
KEGG: AT1G26550;

GSPannotationmethodsrelated
AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21952135(yeast-2-hybrid)

 

Predicted
Functional Partners
annotationTotal
AT5G58003No related data.
AT5G55160No related data.
AT5G48580No related data.
AT5G47720acetyl-CoA C-acyltransferase, putative / 3-ketoacyl-CoA thiolase, putative
AT5G359103'-5' exonuclease domain-containing protein / helicase and RNase D C-terminal domain-containing protein / HRDC domain-containing protein
AT5G13120peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein
AT5G11860NLI interacting factor (NIF) family protein
AT4G38740No related data.
AT4G35800No related data.
AT4G34870No related data.
AT4G25630No related data.
AT4G21710No related data.
AT4G08350No related data.
AT3G57660No related data.
AT3G25230No related data.
AT3G23890No related data.
AT3G22320No related data.
AT3G16980No related data.
AT2G43560immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein
AT2G41630No related data.
AT2G41620nucleoporin interacting component family protein
AT2G38730peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative
AT2G36130peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative
AT2G23070casein kinase II alpha chain, putative
AT2G15790No related data.
AT1G73820Ssu72-like family protein
AT1G55900No related data.

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
What does the displayed number mean when your mouse moved over a certain icon?(LR)