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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:AT1G18440  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT1G18440AT1G18440GSP:2 PPI:24peptidyl-tRNA hydrolase family protein.
Subcellar localization
plastid: Pubmed18431481;
Related organ
cell suspension culture      urea fraction,1-DE      Related article
flower      SDS fraction,1-DE      Related article
silique      detergent fraction,1-DE      Related article
Representative Gene Model Description
AT1G18440.1:peptidyl-tRNA hydrolase family protein; FUNCTIONS IN: aminoacyl-tRNA hydrolase activity; INVOLVED IN: translation; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-tRNA hydrolase, conserved site (InterPro:IPR018171), Peptidyl-tRNA hydrolase (InterPro:IPR001328); BEST Arabidopsis thaliana protein match is: peptidyl-tRNA hydrolase family protein (TAIR:AT5G16140.2); Has 5517 Blast hits to 5515 proteins in 1423 species: Archae - 0; Bacteria - 2880; Metazoa - 37; Fungi - 63; Plants - 75; Viruses - 0; Other Eukaryotes - 2462 (source: NCBI BLink).

Database cross-references
TAIR Gene: AT1G18440;
IPI: IPI00539130;
UniParc: UPI0000196D7A;
REFSEQ_PROVISIONAL: NP_173279.2;
KEGG: AT1G18440;

GSPannotationmethodsrelated
AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT3G26090(RGS1)RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1); G-protein coupled receptortext mining 21952135(yeast-2-hybrid)

 

Predicted
Functional Partners
annotationTotal
ATCG01240No related data.
ATCG00900No related data.
AT5G64560magnesium transporter CorA-like family protein (MRS2-2)
AT5G58060No related data.
AT5G39510No related data.
AT5G22830No related data.
AT5G22360No related data.
AT5G16830No related data.
AT4G34350No related data.
AT4G20360No related data.
AT4G16520No related data.
AT4G02195No related data.
AT3G56190No related data.
AT3G54860No related data.
AT3G15580No related data.
AT2G47510No related data.
AT2G37270No related data.
AT2G05630No related data.
AT1G79590No related data.
AT1G62040No related data.
AT1G48760No related data.
AT1G28490No related data.

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
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