Home Contact Sitemap

AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:AT1G08480  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT1G08480AT1G08480GSP:5 PPI:5hypothetical protein.
Subcellar localization
plasma membrane: Pubmed15574830; mitochondrion: Pubmed12970493; vacuole: Pubmed17151019;
Related organ
carpel      detergent fraction,1-DE      Related article
carpel      urea fraction,1-DE      Related article
carpel      soluble fraction,1-DE      Related article
cell suspension culture      full cell extract,1-DE      Related article
cell suspension culture      soluble fraction,1-DE      Related article
cell suspension culture      urea fraction,1-DE      Related article
cell suspension culture      triton fraction,Schagger 1-DE      Related article
cell suspension culture      SDS fraction,Schagger 1-DE      Related article
flower      SDS fraction,1-DE      Related article
flower bud      SDS fraction,1-DE      Related article
juvenile leaf      SDS fraction,1-DE      Related article
pollen      combined fractions, 1-DE      Related article
pollen      soluble fraction, 1-DE      Related article
pollen      urea fraction, 1-DE      Related article
pollen      detergent fraction, 1-DE      Related article
pollen      urea total extract, 1-DE      Related article
pollen      total extract, ICAT labelling, avidin affinity flow through      Related article
root      SDS fraction,1-DE      Related article
seed      detergent fraction,1-DE      Related article
seed      urea fraction,1-DE      Related article
silique      urea fraction,1-DE      Related article
silique      detergent fraction,1-DE      Related article
shoot      Flow through fraction: SDS fraction of A. thaliana shoots; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography      Related article
rosette      Flow through fraction: Soluble fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC affinity chromatography      Related article
Representative Gene Model Description
AT1G08480.1:unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plasma membrane, plastid, vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; Has 22 Blast hits to 22 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

Database cross-references
TAIR Gene: AT1G08480;
IPI: IPI00537246;
UniParc: UPI000009F0F4;
REFSEQ_PROVISIONAL: NP_563819.1;
KEGG: AT1G08480;

GSPannotationmethodsrelated
AT5G66760(SDH1-1)SDH1-1; ATP binding / succinate dehydrogenasetext mining 12970493(biochemical)
AT5G14240hypothetical proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT4G25660hypothetical proteintext mining 21798944(yeast-2-hybrid)
AT1G14340RNA recognition motif (RRM)-containing proteintext mining 21798944(yeast-2-hybrid)
AT5G14240hypothetical proteintext mining 21952135(yeast-2-hybrid)