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AtPID

Arabidopsis thaliana Protein Interactome Database

Search Results

Query protein:NTMC2T2.1  Network Display  
LocusSymbolNumber of interactionsAnnotation
AT1G05500NTMC2T2.1GSP:4 PPI:17NTMC2T2.1.
Subcellar localization
plasma membrane: Pubmed17317660;
Related organ
carpel      urea fraction,1-DE      Related article
cell suspension culture      full cell extract,1-DE      Related article
cell suspension culture      SDS fraction,1-DE      Related article
cell suspension culture      detergent fraction,1-DE      Related article
cell suspension culture      urea fraction,1-DE      Related article
cell suspension culture      triton fraction,Schagger 1-DE      Related article
cell suspension culture      soluble fraction,Schagger 1-DE      Related article
cell suspension culture      SDS fraction,Schagger 1-DE      Related article
cotyledon      SDS fraction,1-DE      Related article
flower      SDS fraction,1-DE      Related article
flower bud      SDS fraction,1-DE      Related article
juvenile leaf      SDS fraction,1-DE      Related article
pollen      urea fraction, 1-DE      Related article
pollen      cyclohexane fraction, 1-DE      Related article
root      SDS fraction,1-DE      Related article
seed      detergent fraction,1-DE      Related article
seed      urea fraction,1-DE      Related article
silique      urea fraction,1-DE      Related article
silique      detergent fraction,1-DE      Related article
Representative Gene Model Description
AT1G05500.1:NTMC2T2.1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding region, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: SYTD (TAIR:AT5G11100.1); Has 9319 Blast hits to 5090 proteins in 209 species: Archae - 0; Bacteria - 0; Metazoa - 6456; Fungi - 877; Plants - 1262; Viruses - 0; Other Eukaryotes - 724 (source: NCBI BLink).

Database cross-references
TAIR Gene: AT1G05500;
IPI: IPI00548718;
UniParc: UPI000009E25E;
REFSEQ_PROVISIONAL: NP_172041.2;
KEGG: AT1G05500;

GSPannotationmethodsrelated
AT4G17730(SYP23)SYP23 (SYNTAXIN OF PLANTS 23); SNAP receptortext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT4G26410hypothetical proteintext mining 21036873(yeast-2-hybrid assay:FDS1176001)
AT4G26410hypothetical proteintext mining 21952135(yeast-2-hybrid)
AT4G17730(SYP23)SYP23 (SYNTAXIN OF PLANTS 23); SNAP receptortext mining 21952135(yeast-2-hybrid)

 

Predicted
Functional Partners
annotationTotal
AT1G09200histone H3
AT1G59820No related data.
AT1G70600structural constituent of ribosome
AT1G75560zinc knuckle (CCHC-type) family protein
AT2G22425peptidase
AT2G39770No related data.
AT3G27360histone H3
AT3G27730No related data.
AT4G16970ATP binding / kinase/ protein kinase/ protein serine/threonine kinase
AT5G08080No related data.
AT5G10390histone H3
AT5G10400histone H3
AT5G65360histone H3

O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
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