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Arabidopsis thaliana Protein Interactome Database

Pair Search Results


Query protein:AT5G64330-RPT3Network Display
Gold Standard Positiverelated
Method: text mining 11742986(yeast-2-hybrid assay)
LocusSymbolNumber of interactionsAnnotation
AT5G64330NPH3GSP:14 PPI:25See DetailNPH3 (NON-PHOTOTROPIC HYPOCOTYL 3); protein binding / signal transducer.
Subcellar localization
vacuole: Pubmed18686298;
Representative Gene Model Description
AT5G64330.1:NON-PHOTOTROPIC HYPOCOTYL 3 (NPH3); FUNCTIONS IN: protein binding, signal transducer activity; INVOLVED IN: phototropism, response to light stimulus, blue light signaling pathway; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: phototropic-responsive NPH3 family protein (TAIR:AT1G30440.1); Has 601 Blast hits to 434 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 595; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

AT5G64330.2:NON-PHOTOTROPIC HYPOCOTYL 3 (NPH3); FUNCTIONS IN: protein binding, signal transducer activity; INVOLVED IN: phototropism, response to light stimulus, blue light signaling pathway; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: phototropic-responsive NPH3 family protein (TAIR:AT1G30440.1); Has 558 Blast hits to 409 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 555; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

Phosphorylation info: Phosphoprotein with evidence,detail info please click the following link
Database cross-references
TAIR Gene: AT5G64330;
IPI: IPI00891244; IPI00542309;
UniParc: UPI00017395D4; UPI0000162934;
REFSEQ: NP_568989.1; NP_001119489.1;
KEGG: AT5G64330;
LocusSymbolNumber of interactionsAnnotation
AT5G58290RPT3GSP:9 PPI:27See DetailRPT3 (REGULATORY PARTICLE TRIPLE-A ATPASE 3); ATPase.
Subcellar localization
cytosol: Pubmed16381842; nucleus: Pubmed16381842;
Representative Gene Model Description
AT5G58290.1:REGULATORY PARTICLE TRIPLE-A ATPASE 3 (RPT3); FUNCTIONS IN: ATPase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome regulatory particle, base subcomplex, cell wall, nucleus, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), 26S proteasome subunit P45 (InterPro:IPR005937); BEST Arabidopsis thaliana protein match is: RPT2a (regulatory particle AAA-ATPase 2a); ATPase (TAIR:AT4G29040.1); Has 22606 Blast hits to 20990 proteins in 1795 species: Archae - 853; Bacteria - 6831; Metazoa - 4075; Fungi - 2440; Plants - 1789; Viruses - 35; Other Eukaryotes - 6583 (source: NCBI BLink).

Related KEGG pathway    
Genetic Information Processing
   |----------Folding, Sorting and Degradation
   |--------------------ProteasomeLink to keggView overall Pathway
Database cross-references
TAIR Gene: AT5G58290;
IPI: IPI00537564;
UniParc: UPI0000132370;
REFSEQ: NP_200637.1;
KEGG: AT5G58290;

query fail :Table 'shiyan_test.at_domain' doesn't exist