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Arabidopsis thaliana Protein Interactome Database

Pair Search Results


Query protein:AT5G64140-AT3G44010Network Display
Predicted Functional Partner
Total likelihood ratio:200
LocusSymbolNumber of interactionsAnnotation
AT5G64140RPS28GSP:2 PPI:73See DetailRPS28 (RIBOSOMAL PROTEIN S28); structural constituent of ribosome.
Subcellar localization
cytosol: Pubmed16381842;
Related complex
Ribosome, archaea
Ribosome, eukaryotes
Representative Gene Model Description
AT5G64140.1:RIBOSOMAL PROTEIN S28 (RPS28); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein S28e (InterPro:IPR000289); BEST Arabidopsis thaliana protein match is: 40S ribosomal protein S28 (RPS28B) (TAIR:AT5G03850.1); Has 802 Blast hits to 802 proteins in 280 species: Archae - 145; Bacteria - 0; Metazoa - 260; Fungi - 104; Plants - 121; Viruses - 0; Other Eukaryotes - 172 (source: NCBI BLink).

Related KEGG pathway    
Genetic Information Processing
   |----------Translation
   |--------------------RibosomeLink to keggView overall Pathway
Database cross-references
TAIR Gene: AT5G64140;
IPI: IPI00522792;
UniParc: UPI0000000E47;
REFSEQ: NP_201219.1;
KEGG: AT5G64140;
LocusSymbolNumber of interactionsAnnotation
AT3G44010AT3G44010GSP:1 PPI:120See Detail40S ribosomal protein S29 (RPS29B).
Representative Gene Model Description
AT3G44010.1:40S ribosomal protein S29 (RPS29B); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, ribosome; EXPRESSED IN: male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein S14 (InterPro:IPR001209); BEST Arabidopsis thaliana protein match is: 40S ribosomal protein S29 (RPS29C) (TAIR:AT4G33865.1); Has 693 Blast hits to 693 proteins in 260 species: Archae - 152; Bacteria - 0; Metazoa - 228; Fungi - 88; Plants - 102; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink).

Phosphorylation info: Phosphoprotein with evidence,detail info please click the following link
Database cross-references
TAIR Gene: AT3G44010;
REFSEQ: NP_189987.1;
KEGG: AT3G44010;

query fail :Table 'shiyan_test.at_domain' doesn't exist