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Arabidopsis thaliana Protein Interactome Database

Pair Search Results

Query protein:AT5G64140-AT3G10090Network Display

Predicted Functional Partner
Total likelihood ratio:2047.61

Locus

Symbol

Number of interactions

Annotation

AT5G64140

RPS28

GSP:2 PPI:73See Detail

RPS28 (RIBOSOMAL PROTEIN S28); structural constituent of ribosome.

Subcellar localization
cytosol: Pubmed16381842;

Related complex
Ribosome, archaea
Ribosome, eukaryotes

Representative Gene Model Description
AT5G64140.1:RIBOSOMAL PROTEIN S28 (RPS28); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein S28e (InterPro:IPR000289); BEST Arabidopsis thaliana protein match is: 40S ribosomal protein S28 (RPS28B) (TAIR:AT5G03850.1); Has 802 Blast hits to 802 proteins in 280 species: Archae - 145; Bacteria - 0; Metazoa - 260; Fungi - 104; Plants - 121; Viruses - 0; Other Eukaryotes - 172 (source: NCBI BLink).

Related KEGG pathway
Genetic Information Processing
\|----------Translation
\|--------------------Ribosome	Link to kegg	View overall Pathway

Database cross-references
TAIR Gene: AT5G64140;
IPI: IPI00522792;
UniParc: UPI0000000E47;
REFSEQ: NP_201219.1;
KEGG: AT5G64140;

Locus	Symbol	Number of interactions	Annotation
AT3G10090	AT3G10090	GSP:0 PPI:82See Detail	40S ribosomal protein S28 (RPS28A).
Subcellar localization cytosol: Pubmed15821981;
Representative Gene Model Description AT3G10090.1:40S ribosomal protein S28 (RPS28A); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein S28e (InterPro:IPR000289); BEST Arabidopsis thaliana protein match is: 40S ribosomal protein S28 (RPS28B) (TAIR:AT5G03850.1); Has 804 Blast hits to 804 proteins in 280 species: Archae - 145; Bacteria - 0; Metazoa - 262; Fungi - 104; Plants - 121; Viruses - 0; Other Eukaryotes - 172 (source: NCBI BLink).
Database cross-references TAIR Gene: AT3G10090; IPI: IPI00519631; REFSEQ: NP_187620.1; KEGG: AT3G10090;

query fail :Table 'shiyan_test.at_domain' doesn't exist