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Arabidopsis thaliana Protein Interactome Database

Pair Search Results


Query protein:AT3G24120-UNE16Network Display
Gold Standard Positiverelated
Method: text mining 21036873(yeast-2-hybrid assay:FDS1176001)
LocusSymbolNumber of interactionsAnnotation
AT3G24120AT3G24120GSP:10 PPI:11See Detailmyb family transcription factor.
Subcellar localization
nucleus: Pubmed12444417;
Representative Gene Model Description
AT3G24120.1:myb family transcription factor; FUNCTIONS IN: transcription factor activity; INVOLVED IN: regulation of transcription; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-type HTH DNA-binding domain (InterPro:IPR017930), Myb-like DNA-binding region, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: UNE16 (unfertilized embryo sac 16); transcription factor (TAIR:AT4G13640.1); Has 946 Blast hits to 937 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 39; Fungi - 0; Plants - 895; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).

AT3G24120.2:myb family transcription factor; FUNCTIONS IN: transcription factor activity; INVOLVED IN: regulation of transcription; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-type HTH DNA-binding domain (InterPro:IPR017930), Myb-like DNA-binding region, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: UNE16 (unfertilized embryo sac 16); transcription factor (TAIR:AT4G13640.2); Has 910 Blast hits to 901 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 897; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).

Database cross-references
TAIR Gene: AT3G24120;
IPI: IPI00655459; IPI00531757;
UniParc: UPI00000A02B6; UPI00000A669F;
REFSEQ: NP_566744.1; NP_974356.1;
KEGG: AT3G24120;
LocusSymbolNumber of interactionsAnnotation
AT4G13640UNE16GSP:34 PPI:35See DetailUNE16 (unfertilized embryo sac 16); transcription factor.
Subcellar localization
nucleus: Pubmed12444417;
Representative Gene Model Description
AT4G13640.1:unfertilized embryo sac 16 (UNE16); FUNCTIONS IN: transcription factor activity; INVOLVED IN: double fertilization forming a zygote and endosperm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-type HTH DNA-binding domain (InterPro:IPR017930), Myb-like DNA-binding region, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb family transcription factor (TAIR:AT3G24120.1); Has 906 Blast hits to 896 proteins in 41 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 0; Plants - 893; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).

AT4G13640.2:unfertilized embryo sac 16 (UNE16); FUNCTIONS IN: transcription factor activity; INVOLVED IN: double fertilization forming a zygote and endosperm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-type HTH DNA-binding domain (InterPro:IPR017930), Myb-like DNA-binding region, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb family transcription factor (TAIR:AT3G24120.2); Has 907 Blast hits to 897 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 896; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).

Database cross-references
TAIR Gene: AT4G13640;
IPI: IPI00657591; IPI00656907;
UniParc: UPI00005DC06E; UPI00000AA648;
REFSEQ: NP_567408.1; NP_001031626.1;
KEGG: AT4G13640;

query fail :Table 'shiyan_test.at_domain' doesn't exist